Gene Nwi_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0303 
Symbol 
ID3676132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp344602 
End bp345126 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID637711843 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_316922 
Protein GI75674501 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTCG ATGTCGCGCG ATTGCTGTTA TTCCCCGCGC TGATGGCGTT CGCGGCCGCG 
AGCGACCTGC TGACCATGAC GATCTCGAAC AGGGTGTCGC TGCTCTTGGT CGCCGGCTTC
CTCGTGCTGG CTCCGCTGAG CGGCATGGGA CTTCACGAAA TGCTATCCCA TGCGGGAGCG
GGGCTTGCGG TCCTCGTCGT GGCGTTCTCG TGTTTCGCGA TGGGCTGGGT CGGCGGCGGC
GACGCCAAGG TGGCGGCGGC GGCCGCTCTC TGGTTCGGCT TCGGGCACAC GCTGGAATAC
CTCGTCTATG CCTCCCTGTT CGGCGGAGCC CTCACGCTCC TGCTGCTCCA GTTCCGGCAA
TGGCCTTTGC CGGCCTCGCT TTACGGTCAG GACTGGCTTC TCCGGCTGCA CGGCAAGAAC
ACCGGCATCC CCTATGGCAT CGCGCTCGCC TTCGCGGCCC TGCTGATCTA CCCGGAAACC
GACTGGGTGC GAGCCGTCGA TCTGGCGCGC TTCGGCCTTA ACTGA
 
Protein sequence
MVLDVARLLL FPALMAFAAA SDLLTMTISN RVSLLLVAGF LVLAPLSGMG LHEMLSHAGA 
GLAVLVVAFS CFAMGWVGGG DAKVAAAAAL WFGFGHTLEY LVYASLFGGA LTLLLLQFRQ
WPLPASLYGQ DWLLRLHGKN TGIPYGIALA FAALLIYPET DWVRAVDLAR FGLN