Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0298 |
Symbol | |
ID | 3677126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 338452 |
End bp | 339918 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637711838 |
Product | type II secretion system protein E |
Protein accession | YP_316917 |
Protein GI | 75674496 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGGCA AGCGTAGCGG ACCAGAGGAC AACGCCCGGA AGCTGGCGAG CCTGACGGAG GTCATGCCGC CACCCTCGAA CGCGCGAGCT TCCGCGGAAA TCGCTTCGCC AAAGATCGCC TCGCCGCCGC TCGCGCCGCC GCGCCCGGCG GCCCAGACGC CAAGCATCGA CGCCCGCAGG TCCGACACCT ATTACCAGGT CAAGGCGACC ATTTTCGGCG CTTTGATCGA GGCCATCGAC CTCGCCCAGC TCGCCAAACT CGACGGCGAG TCCGCGCGCG AGGAAATTCG CGACATCGTC AACGAGATCA TCGCGATCAA GAATATCGTG ATGTCGATCG CCGAGCAGGA AGAACTGCTC GACGACATCT GCAACGACGT TCTCGGGTAT GGACCGCTCG AGCCGCTGCT GTCCCGCGAC GATATCGCCG ACATCATGGT CAACGGCGCC GGCACGGTCT TCATCGAGGT CGCGGGAAAG ATCCAGCGCA CCGGAATCCG GTTCCGCGAC AATCAGCAGC TGCTGAACAT CTGTCAGCGG ATCGTCAGCC AGGTCGGGCG GCGGGTCGAT GAGTCCTCGC CGATATGCGA CGCTCGTCTC GCCGACGGAT CCCGCGTCAA CGCCATCGTC CCGCCGCTCG CGATCGACGG GCCCGCGCTG ACGATCCGTA AGTTCAAGAA GGACAAGCTG ACCCTCGATC AACTGGTCAG GTTCGGCGCC ATCACTCCCG AAGGCGGCAC GATCCTTCAA ATCATCGGGC GGTGCCGCGC CAATGTGCTG ATCTCGGGCG GCACCGGCTC CGGCAAGACC ACGCTGCTGA ACTGCATCAC CAACTATATC GACCACGACG AACGCATCAT CACCTGCGAG GACGCGGCCG AGCTTCAGTT GCAGCAACCG CACGTCGTTC GGCTCGAAAC CCGTCCCCCC AACATCGAGG GCGAAGGCCA GATAACGATG CGCGACCTGG TCCGCAACTG CCTGCGCATG CGCCCCGAGC GCATCATCGT CGGCGAGGTT CGCGGACCGG AGGCATTCGA CCTGCTGCAG GCCATGAACA CCGGCCATGA CGGTTCGATG GGCACGCTGC ACGCGAATAA CCCGCGCGAA GCGCTATCGC GCTGCGAATC GATGATCACG ATGGGCGGCT TTGCACTGCC TTCGCGCACG ATCCGCGAGA TGATCTGCGC CTCGATCGAC ATCATCATCC AGGCCGCGCG CCTGCGCGAC GGCTCGCGAC GCATCACCCA CATTACCGAG CTGATGGGGA TGGAGGGCGA CACCATCATC ACCCAGGATA TCTTCGTCTA CGATCTGCTC GGTGAGGATG CCAACGGCAA CGTGATCGGC CGGCACCGTT CGACGGGAAT CGGCCGGCCG CGGTTCTGGG AACGCGCGCG GTACTACGGC GAGGAGAAGC GACTTGCCGC CGCGCTCGAT GCGGCGGAAG TCAAGGTCGA GATCTGA
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Protein sequence | MFGKRSGPED NARKLASLTE VMPPPSNARA SAEIASPKIA SPPLAPPRPA AQTPSIDARR SDTYYQVKAT IFGALIEAID LAQLAKLDGE SAREEIRDIV NEIIAIKNIV MSIAEQEELL DDICNDVLGY GPLEPLLSRD DIADIMVNGA GTVFIEVAGK IQRTGIRFRD NQQLLNICQR IVSQVGRRVD ESSPICDARL ADGSRVNAIV PPLAIDGPAL TIRKFKKDKL TLDQLVRFGA ITPEGGTILQ IIGRCRANVL ISGGTGSGKT TLLNCITNYI DHDERIITCE DAAELQLQQP HVVRLETRPP NIEGEGQITM RDLVRNCLRM RPERIIVGEV RGPEAFDLLQ AMNTGHDGSM GTLHANNPRE ALSRCESMIT MGGFALPSRT IREMICASID IIIQAARLRD GSRRITHITE LMGMEGDTII TQDIFVYDLL GEDANGNVIG RHRSTGIGRP RFWERARYYG EEKRLAAALD AAEVKVEI
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