| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0297 |
|---|
| Symbol | |
|---|
| ID | 3677125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 337465 |
|---|
| End bp | 338439 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637711837 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_316916 |
|---|
| Protein GI | 75674495 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTGC AGACCCTGGC CCTGGCATTC ATGGCCGCGA CCGCGGTGGG CGGCGTCGCG
TGGGTTTTCC TGTACCCGGT GCTATCGGGC GAGATGAAAG CTGAGAAGCG CCGGGCGGCG
CTGGCGCGGA CATCCCCGGC CATCCGGCAG GTCGACCGAG CCCAACGCTC GCGCCGCGAG
CAGATCGAGG AATCGCTGCG GGAGATCGAG CAACGCCAGA AGCGCGACAG AAAGGTTACC
CTCAACAACC GCATCGCACA GGCGGGCCTG TCGTGGTCGA AGGAGAAGTT CCTGATCGTT
TCCGGCATTC TCGCCCTGGC CAGCTTTGCC GTTCCCATTG TTCTGGGAGC CGGGCCGCTT
GCGGCAGCAG GCCTGGCCTT CGCGGCTGGC TTCGGCGTGC CGCGCTGGCT GCTCGGTTTC
CTCAAGAAGC GCCGGGAGAC CGCGTTCTTG CGCGCGCTCC CCGATGCGGT GGACGTGATC
GTCCGCGGCA TTAAAGCCGG CCTGCCGCTG TTCGAGTCGC TCAAGGTTGT CGCGGCCGAT
TCGCCGGAGC CGCTGAAAAG CGAATTCGCG GCGATCATCG AGACCCAGGC CATCGGGATG
CCGCTCGGTG AAGCCTGCTC GCGGCTGTAC GAGCGAATGC CGGTTCCCGA AGCGAATTTT
TTCGGCATCG TGATCGCGAT CCAGCAGAAA TCCGGGGGCA ATCTTTCGGA AGCTCTCGGC
AACCTGTCCA AGGTGCTGAG GGACCGCAAG AAGATGGCGG AGAAGATCAA GGCGGTGTCG
ATGGAAGCCA AGGCGTCGGC CGCCATCATC GGCTCGCTCC CGCCGATCGT CATGCTGCTG
GTCTATCTAT CCACTCCCGA CTACATCGCG CTGCTGTGGA CCCACCCTAC CGGGCGGCTG
ATGCTGGCCG GCTCCGCGCT GTGGATGACG GCCGGCATCC TCGTGATGAA GAAAATGATC
AACTTCGACT TCTGA
|
|---|
| Protein sequence | MNLQTLALAF MAATAVGGVA WVFLYPVLSG EMKAEKRRAA LARTSPAIRQ VDRAQRSRRE
QIEESLREIE QRQKRDRKVT LNNRIAQAGL SWSKEKFLIV SGILALASFA VPIVLGAGPL
AAAGLAFAAG FGVPRWLLGF LKKRRETAFL RALPDAVDVI VRGIKAGLPL FESLKVVAAD
SPEPLKSEFA AIIETQAIGM PLGEACSRLY ERMPVPEANF FGIVIAIQQK SGGNLSEALG
NLSKVLRDRK KMAEKIKAVS MEAKASAAII GSLPPIVMLL VYLSTPDYIA LLWTHPTGRL
MLAGSALWMT AGILVMKKMI NFDF
|
|---|
| |