| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0296 |
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| Symbol | |
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| ID | 3677124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 336475 |
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| End bp | 337452 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637711836 |
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| Product | type II secretion system protein |
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| Protein accession | YP_316915 |
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| Protein GI | 75674494 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA TCCTGATCGA GAAATTCCAC AACCCGCAAT TCATGACGAT GGTTCTTGCC
GCCATCGCCG CCAGCGCAAC CGTCTACACG CTGATCACGC CCTTCTTTGC GGCGGACGGT
CTTACCAAGC GGATGAAGGC CGTCGCCAGC GAGCGCGAGC GCATTCGGCT GCGCGAGCGC
GAACGGCTCG CGAGAACCGA GAAGGTCTCG CTTCGTCAGG CGCCGAAGCA GTTCATCTCG
AAGATCGTGG AGGATCTCAA TCTCGGGAAA TGGGTGGCTC AGGAAGCCGC CCGCGAGAAG
CTTGTCATGG CGGGATATCG CGGCCAGGCT CCGTACGTCA CCTTCCTGTT CTTCCGCATG
GTCACCCCGA TCGTGATGCT GATCGGAGCG ATCGCCTATG TTTTTCTTCT ATCGCACACG
CAGCAGTCCA CAACTGTCAA GCTCGGCATC TGCATCGGCG CCACGTTCTT CGGCATGCAG
GCGCCGATGC TGTTTCTGCA TAACGCCATT ACGAAGCGCC AGCTCTCGAT CAAGCGGGCT
TTCCCGGACG CGCTCGACCT GCTGCTGATC TGCCTTGAAT CCGGCATGTC GATCGAAGTC
GCGTTCCGCA AGGTCAGTAC GGAGACCGGC AACCAGTCGG TCGCGCTGGC CGAGGAGCTC
ACGCTGACCA CGGCGGAACT GTCGTACCTA CAGGACCGCA AGGTCGCCTA CGAGAATCTG
GCGAACCGCA CCGGCGTGGA AGGGGTGAAA TCGGTGTGTC TCGCGCTCCA GCAATCAGAA
CGATACGGCA CCCCGCTCGC GCAAAGCCTT CGCGTGATGG CGCAGGAAAA TCGCGACATG
CGCATGACCG AGGCCGAGAA GAAGGCAGCC GCCCTGCCGC CCAAGCTGAC GGTCCCGATG
ATCGTGTTCT TCCTGCCCGT GCTGTTCGTG GTCATTCTCG GACCGACCGG CATCAAGATC
GCGGCGCAGA TGCACTGA
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| Protein sequence | MLDILIEKFH NPQFMTMVLA AIAASATVYT LITPFFAADG LTKRMKAVAS ERERIRLRER
ERLARTEKVS LRQAPKQFIS KIVEDLNLGK WVAQEAAREK LVMAGYRGQA PYVTFLFFRM
VTPIVMLIGA IAYVFLLSHT QQSTTVKLGI CIGATFFGMQ APMLFLHNAI TKRQLSIKRA
FPDALDLLLI CLESGMSIEV AFRKVSTETG NQSVALAEEL TLTTAELSYL QDRKVAYENL
ANRTGVEGVK SVCLALQQSE RYGTPLAQSL RVMAQENRDM RMTEAEKKAA ALPPKLTVPM
IVFFLPVLFV VILGPTGIKI AAQMH
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