Gene Nwi_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0293 
Symbol 
ID3677121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp333090 
End bp333935 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID637711833 
Productcell wall-associated hydrolase 
Protein accessionYP_316912 
Protein GI75674491 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC CGCGACTCAC ACCGGCCAGG CCCGAGGTCG CAGCCCGCTA TCTGGAGGGC 
CGGGTCGACG CGGCGCGCTT CACCGATGGC GAGGAATTCG AAGTCGTCGA AGCGGCGGCG
CCCCTGCAGC GCGAGCCTGC GCCGGATGCG ATGCTCCAGA CCCAGGCGCT GCGCGGCGAG
CGGGTCACAG TCTACGACCA CGACGCTGAA GGCTGGGCCT GGGGCCAGTT GAACGGCGAC
GGCTATGTCG GCTGGCTTCC GGACCGCGCG CTGGCTCGGC CCGGCCCGGC ACCGACACAC
AAGGTCACGG CCTTGCGGAC GTTTGCATTT CCCGGGCCGT CGATCAAGCT GCCGCCGCTG
GAGACGTTCT CGCTCGGCGC AAGACTCACT GTCCAGCGCC ACGACGGCTG CTTCGCCGTC
ACTGATGATC GCCTATACAT CCCCGCCCCC CATGTCGCGC CGCTCGATCA TAGCGCGGCG
GATTTCGTCA CGGTGGCCGA AATGTTCGTC GGAACGCCGT ATCTATGGGG CGGCAAGACC
AGTCTCGGCA TCGATTGCTC CGGCCTCGTG CAGGTCGCGC TCAACGCATC CGGAATCGCC
TGTCCGCGCG ACAGCGACAT GCAGGAAGCG GCCATCGGCC GCACGCTGTC TCCGCAGGAG
GCGCAACAGC CGCGACGCGG TGATCTGATG TTCTGGAAAG GACACGTCGC CATCGTCCGG
AACGAGGCCA CGCTTCTCCA CGCCAACGCT CATCACATGG CGACGGCGAT CGAGGGTATT
CACGACGCGG TCACCCGCAT CAAGGCGGCG GGAAGCGATG TAACGAGCGT GAAACGGCTG
GCTTGA
 
Protein sequence
MDDPRLTPAR PEVAARYLEG RVDAARFTDG EEFEVVEAAA PLQREPAPDA MLQTQALRGE 
RVTVYDHDAE GWAWGQLNGD GYVGWLPDRA LARPGPAPTH KVTALRTFAF PGPSIKLPPL
ETFSLGARLT VQRHDGCFAV TDDRLYIPAP HVAPLDHSAA DFVTVAEMFV GTPYLWGGKT
SLGIDCSGLV QVALNASGIA CPRDSDMQEA AIGRTLSPQE AQQPRRGDLM FWKGHVAIVR
NEATLLHANA HHMATAIEGI HDAVTRIKAA GSDVTSVKRL A