Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0283 |
Symbol | metH |
ID | 3677111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 317257 |
End bp | 321129 |
Gene Length | 3873 bp |
Protein Length | 1290 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637711823 |
Product | B12-dependent methionine synthase |
Protein accession | YP_316902 |
Protein GI | 75674481 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.383841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCG TGACAAAAAG TTCGAACACC ATCGCCGACA AATTCCGCGC CCTCGCTCGC GAACGCATTC TGGTGCTCGA CGGCGCCATG GGCACCATGA TCCAGAATCG GGGATTCGAC GAAGCCGCAT TCCGCGGCGA GCGGTTCAAG AATTTTCACC GCGACGTGCG CGGCAACAAC GACCTTCTCA TCCTCACCCA GCCGCAAGCG ATCGAGGACA TCCACGCGCA ATACCTGCGC GCCGGCGCCG ACCTCGTCGC CACCAACACG TTTTCATCGA CCTCGATCGC GCAGGCCGAC TATGATATGT CGGATCTCGT GTACGAACTC AATCGCGAGG GCGCGAAGCT CGCGCGCTCG GCCGCGGAGA AAGTCAGCGC CGAGGACGGC AAGCCGCGCT TCGTCGTCGG CGCCATCGGC CCGACCAACC GCACCGCGTC GATCTCGCCG GACGTCGCGA ACCCCGGATA CCGGGCGGTG ACCTTCGACG ACCTGCGCAA GTCCTATGGC GAACAGATCA ACGGCCTGCT CGACGGCGGC GCCGATCTGC TGCTGGTCGA AACCATCTTC GACACGCTGA ACGCCAAGGC GGCGCTGTAC GCCATCGCCG AAATCGGCGA ACAGCGCGGT ATCGACATTC CGGTAATGGT CTCGGGAACC ATCACCGACA AGTCCGGCCG CCTGCTGTCA GGCCAGTTGC CCGAGGCGTT CTGGCACTCG GTGCGGCACG CGGGGCCGAT CACCATCGGC TTCAACTGCG CGCTCGGCGC CGAAGACCTG CGCGCGCACG TCGCCGAGAT CGGCCGCGTC GCCGATACGC TGGTATGCGC CTATCCGAAC GCGGGCCTGC CCAACGAGTT CGGCGAGTAC GACGAAAGCC CCGATTACAT GGCGCGGCTG ATCGGCGAGT TCGCGCAGGC CGGCCTCGTC AACGTCGTCG GCGGTTGCTG CGGCACCACG CCGGATCATA TCGCGGCGAT CGCGGCAGCC GTCGCGCCGC ACAAGCCGCG CGTCGTGCCG GTGATCGAGC CGCGGTTGCG GCTGTCGGGG CTGGAGCCGT TCTCGCTGAC CTCCGACATT CCCTTCGTCA ATGTCGGCGA GCGCACCAAC GTCACGGGCT CAGCCAAATT CCGCAACCTG ATCAAGGCCG GGGACTATGC CGCCGCCCTC GACGTGGCGC GCAACCAGGT CGAGAACGGC GCCCAGATCA TCGACGTCAA CATGGACGAA GGCCTGCTGG ATTCGGAAGC GGCGATGGTC ACCTTCCTCA ACCTGATCGC GGCGGAGCCG GACATCGCGC GCGTGCCCGT GATGGTCGAC TCCTCCAAGT TCTCCGTGAT CGAGGCCGGG CTGAAATGCC TGCAGGGCAA GCCGGTGGTG AACTCGATCT CGCTCAAGGA AGGCGAGGAG AAGTTTCTGC ACGAGGCGCG GATCGCCCGC CGCCACGGCG CGGCCGTCGT GGTGATGGCG TTCGACGAGC AAGGGCAGGC CGATACCTGC CAGCGCAAGA TGGAAATCTG CAAGCGCGCC TACGACATCC TCGTCGAACA GGTCGGCTTT CCGCCGGAAG ACATCATCTT CGACCCGAAC ATCTTCGCCA TCGCGACGGG TCTCGAGGAG CACAACAACT ACGGCGTCGA TTTCATCGAG GCGACGCGCT GGATCCGCCA GAACCTGCCG CACGCGCACA TCTCGGGCGG CGTCTCCAAC CTGTCGTTCT CGTTCCGCGG CAACGAGCCG GTGCGCGAGG CGATGCACTC GGTGTTCCTC TATCACGCCA TCAAGGCCGG CATGGACCTA GGAATCGTCA ATGCCGGGCA GATGGTCATC TATGACGACA TCGATCCGGA GCTTCGGCAG GTTTGTGAGG ATGTGGTCCT CAACCGCGAT CCCGACGCGG GCGAACGGCT GCTCAATCTC GCGGAAAAAT TCCGCGGGCA AGGCAAGCAG GCCAAGGAGG CCGACCTCTC CTGGCGCGAA TGGCCGGTGG AGAAACGCTT AAGCCACGCG CTGGTCAACG GCATCACCGA ATATATCGAA CAGGACACCG AGGAAGCGCG GAAGTCGGCC GATCGTCCGC TGTCGGTGAT CGAAGGACCG CTGATGGCCG GCATGAACGT GGTCGGCGAC CTGTTCGGCG ACGGCAAGAT GTTCTTGCCG CAGGTGGTGA AGTCGGCGCG GGTGATGAAG CACGCGGTCG CTTATCTGAT GCCGTTCATG GAAGAGGAAA AGGCGCGCAA TCAGGCCGCC GGCATCGAGG GCGCGGGCAG CACCTCCGCC GGCAAGATCC TGCTCGCCAC CGTCAAGGGC GACGTCCACG ATATCGGCAA GAACATCGTC GGCATCGTGC TTCAGTGCAA CAACTACGAG GTGATCGACC TCGGCGTGAT GGTGCCGGCC GCCAAGATCA TCGAGACGGC GAAGGCTGAG AAAGCCGATA TCGTCGGCCT CTCCGGCCTG ATCACGCCGT CGCTGGACGA GATGGGCTAT TTCGCGGCGG AGCTTGAGCG TCAGGGGCTC AACCTGCCGC TCCTGATCGG CGGCGCGACC ACCAGCCGCG TCCATACCGC CGTGAAGATC GATCCCAACT ATCGCAATGG TCCGGTGATC CATGTCAATG ACGCCAGCCG CGCCGTCGGC GTCGTCGCCT CGCTGATGTC GCCGGAGCGG CGGGAGGCTT ACGCGGCCGG CGTGCGCGCC GAATACGCCA AGATTTCCGC GGCGCATTTC CGCGCCCAGC AGGACAAGAA ACGGCTGCCG CTCGCGGCCG CCCGCGCCAA CGCGGTGCCG ATCGACTGGA GCAGCTACCG CCCGGTCAAG CCGACATTTC TCGGAACCAA GGCCTTCGCC GACTATCCGC TGGAGGAACT GGTGGAGGTG ATCGACTGGA CCCCGTTCTT CCAGGTGTGG GAGTTGGCGG GACGCTTTCC GGCGATCCTT GACGACAAGG TGGTGGGCGA AACCGCCCGC GCCCTCTATG ACGACGCGCG AAAGATGCTG GATCGGATCG TCAAGGAGAA ATGGTTCACC GCCTCTAGCG TGATCGGCTT CTGGCCCGCC AACCGCATCG GCGACGATAT CGCCGTCTAT AGCGACGAAA GCCGCACCAC GCAGATCGCG ACCTATCACA CCCTGCGCCA GCAACTTGAA AAGCGCGAGG GCCGTCACAA CGCCGCGCTG GCGGACTTCA TCGCGCCGAA GGAGACCGGC ATCGCCGACT ATATCGGCGG TTTCGCCGTC ACCGCCGGGC TCGGCGAGGA TGAAATCGCG GCGCGCTTCA AGAACGCCAA TGACGACTAT TCATCCATTC TGGTGAAGGC GCTGGCCGAC CGCCTCGCGG AAGCCTTCGC GGAACGGATG CATCAGCGCG TGCGAACGGA ATTCTGGGGC TACGCGCCGG ATGAGGCGTT GACCAACGAT CAGCTCATCC GGGAAGAGTA TGTCGGCATC CGCCCCGCAC CCGGTTATCC GGCGCAGCCC GACCATACCG AGAAGGCCAC GCTGTTCCGC CTGCTGGACG CGACGCGCGC GACCGGCGTC GAACTGACCG AGAGCTTTGC GATGTGGCCG GGGTCCTCGG TCTCCGGTCT CTATTACAGC CATCCCGAGA GTCAGTATTT CGGTGTCGGC AAGATCGAGC GCGATCAGGT CGAGGACTAT GCCGCGCGCA AAGGGATGGA GGTCGCCGAG ATCGAGCGCT GGCTGGCGTC GATCCTCAAC TACATTCCGG GTCAGGATGC TTCCGGAAAG CCCGCAACGA CGCCGGTCCC CGCGCCCGCC AACGACGCCT CCGCCGACGT CGCCAATCAT CCGCCGGGCT GCCAGTGCGC GGTCCATCTG CGGCTTCGCA AGACCACGGC GCGGGCGGGC TGA
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Protein sequence | MTRVTKSSNT IADKFRALAR ERILVLDGAM GTMIQNRGFD EAAFRGERFK NFHRDVRGNN DLLILTQPQA IEDIHAQYLR AGADLVATNT FSSTSIAQAD YDMSDLVYEL NREGAKLARS AAEKVSAEDG KPRFVVGAIG PTNRTASISP DVANPGYRAV TFDDLRKSYG EQINGLLDGG ADLLLVETIF DTLNAKAALY AIAEIGEQRG IDIPVMVSGT ITDKSGRLLS GQLPEAFWHS VRHAGPITIG FNCALGAEDL RAHVAEIGRV ADTLVCAYPN AGLPNEFGEY DESPDYMARL IGEFAQAGLV NVVGGCCGTT PDHIAAIAAA VAPHKPRVVP VIEPRLRLSG LEPFSLTSDI PFVNVGERTN VTGSAKFRNL IKAGDYAAAL DVARNQVENG AQIIDVNMDE GLLDSEAAMV TFLNLIAAEP DIARVPVMVD SSKFSVIEAG LKCLQGKPVV NSISLKEGEE KFLHEARIAR RHGAAVVVMA FDEQGQADTC QRKMEICKRA YDILVEQVGF PPEDIIFDPN IFAIATGLEE HNNYGVDFIE ATRWIRQNLP HAHISGGVSN LSFSFRGNEP VREAMHSVFL YHAIKAGMDL GIVNAGQMVI YDDIDPELRQ VCEDVVLNRD PDAGERLLNL AEKFRGQGKQ AKEADLSWRE WPVEKRLSHA LVNGITEYIE QDTEEARKSA DRPLSVIEGP LMAGMNVVGD LFGDGKMFLP QVVKSARVMK HAVAYLMPFM EEEKARNQAA GIEGAGSTSA GKILLATVKG DVHDIGKNIV GIVLQCNNYE VIDLGVMVPA AKIIETAKAE KADIVGLSGL ITPSLDEMGY FAAELERQGL NLPLLIGGAT TSRVHTAVKI DPNYRNGPVI HVNDASRAVG VVASLMSPER REAYAAGVRA EYAKISAAHF RAQQDKKRLP LAAARANAVP IDWSSYRPVK PTFLGTKAFA DYPLEELVEV IDWTPFFQVW ELAGRFPAIL DDKVVGETAR ALYDDARKML DRIVKEKWFT ASSVIGFWPA NRIGDDIAVY SDESRTTQIA TYHTLRQQLE KREGRHNAAL ADFIAPKETG IADYIGGFAV TAGLGEDEIA ARFKNANDDY SSILVKALAD RLAEAFAERM HQRVRTEFWG YAPDEALTND QLIREEYVGI RPAPGYPAQP DHTEKATLFR LLDATRATGV ELTESFAMWP GSSVSGLYYS HPESQYFGVG KIERDQVEDY AARKGMEVAE IERWLASILN YIPGQDASGK PATTPVPAPA NDASADVANH PPGCQCAVHL RLRKTTARAG
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