Gene Nwi_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0283 
SymbolmetH 
ID3677111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp317257 
End bp321129 
Gene Length3873 bp 
Protein Length1290 aa 
Translation table11 
GC content65% 
IMG OID637711823 
ProductB12-dependent methionine synthase 
Protein accessionYP_316902 
Protein GI75674481 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.383841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCG TGACAAAAAG TTCGAACACC ATCGCCGACA AATTCCGCGC CCTCGCTCGC 
GAACGCATTC TGGTGCTCGA CGGCGCCATG GGCACCATGA TCCAGAATCG GGGATTCGAC
GAAGCCGCAT TCCGCGGCGA GCGGTTCAAG AATTTTCACC GCGACGTGCG CGGCAACAAC
GACCTTCTCA TCCTCACCCA GCCGCAAGCG ATCGAGGACA TCCACGCGCA ATACCTGCGC
GCCGGCGCCG ACCTCGTCGC CACCAACACG TTTTCATCGA CCTCGATCGC GCAGGCCGAC
TATGATATGT CGGATCTCGT GTACGAACTC AATCGCGAGG GCGCGAAGCT CGCGCGCTCG
GCCGCGGAGA AAGTCAGCGC CGAGGACGGC AAGCCGCGCT TCGTCGTCGG CGCCATCGGC
CCGACCAACC GCACCGCGTC GATCTCGCCG GACGTCGCGA ACCCCGGATA CCGGGCGGTG
ACCTTCGACG ACCTGCGCAA GTCCTATGGC GAACAGATCA ACGGCCTGCT CGACGGCGGC
GCCGATCTGC TGCTGGTCGA AACCATCTTC GACACGCTGA ACGCCAAGGC GGCGCTGTAC
GCCATCGCCG AAATCGGCGA ACAGCGCGGT ATCGACATTC CGGTAATGGT CTCGGGAACC
ATCACCGACA AGTCCGGCCG CCTGCTGTCA GGCCAGTTGC CCGAGGCGTT CTGGCACTCG
GTGCGGCACG CGGGGCCGAT CACCATCGGC TTCAACTGCG CGCTCGGCGC CGAAGACCTG
CGCGCGCACG TCGCCGAGAT CGGCCGCGTC GCCGATACGC TGGTATGCGC CTATCCGAAC
GCGGGCCTGC CCAACGAGTT CGGCGAGTAC GACGAAAGCC CCGATTACAT GGCGCGGCTG
ATCGGCGAGT TCGCGCAGGC CGGCCTCGTC AACGTCGTCG GCGGTTGCTG CGGCACCACG
CCGGATCATA TCGCGGCGAT CGCGGCAGCC GTCGCGCCGC ACAAGCCGCG CGTCGTGCCG
GTGATCGAGC CGCGGTTGCG GCTGTCGGGG CTGGAGCCGT TCTCGCTGAC CTCCGACATT
CCCTTCGTCA ATGTCGGCGA GCGCACCAAC GTCACGGGCT CAGCCAAATT CCGCAACCTG
ATCAAGGCCG GGGACTATGC CGCCGCCCTC GACGTGGCGC GCAACCAGGT CGAGAACGGC
GCCCAGATCA TCGACGTCAA CATGGACGAA GGCCTGCTGG ATTCGGAAGC GGCGATGGTC
ACCTTCCTCA ACCTGATCGC GGCGGAGCCG GACATCGCGC GCGTGCCCGT GATGGTCGAC
TCCTCCAAGT TCTCCGTGAT CGAGGCCGGG CTGAAATGCC TGCAGGGCAA GCCGGTGGTG
AACTCGATCT CGCTCAAGGA AGGCGAGGAG AAGTTTCTGC ACGAGGCGCG GATCGCCCGC
CGCCACGGCG CGGCCGTCGT GGTGATGGCG TTCGACGAGC AAGGGCAGGC CGATACCTGC
CAGCGCAAGA TGGAAATCTG CAAGCGCGCC TACGACATCC TCGTCGAACA GGTCGGCTTT
CCGCCGGAAG ACATCATCTT CGACCCGAAC ATCTTCGCCA TCGCGACGGG TCTCGAGGAG
CACAACAACT ACGGCGTCGA TTTCATCGAG GCGACGCGCT GGATCCGCCA GAACCTGCCG
CACGCGCACA TCTCGGGCGG CGTCTCCAAC CTGTCGTTCT CGTTCCGCGG CAACGAGCCG
GTGCGCGAGG CGATGCACTC GGTGTTCCTC TATCACGCCA TCAAGGCCGG CATGGACCTA
GGAATCGTCA ATGCCGGGCA GATGGTCATC TATGACGACA TCGATCCGGA GCTTCGGCAG
GTTTGTGAGG ATGTGGTCCT CAACCGCGAT CCCGACGCGG GCGAACGGCT GCTCAATCTC
GCGGAAAAAT TCCGCGGGCA AGGCAAGCAG GCCAAGGAGG CCGACCTCTC CTGGCGCGAA
TGGCCGGTGG AGAAACGCTT AAGCCACGCG CTGGTCAACG GCATCACCGA ATATATCGAA
CAGGACACCG AGGAAGCGCG GAAGTCGGCC GATCGTCCGC TGTCGGTGAT CGAAGGACCG
CTGATGGCCG GCATGAACGT GGTCGGCGAC CTGTTCGGCG ACGGCAAGAT GTTCTTGCCG
CAGGTGGTGA AGTCGGCGCG GGTGATGAAG CACGCGGTCG CTTATCTGAT GCCGTTCATG
GAAGAGGAAA AGGCGCGCAA TCAGGCCGCC GGCATCGAGG GCGCGGGCAG CACCTCCGCC
GGCAAGATCC TGCTCGCCAC CGTCAAGGGC GACGTCCACG ATATCGGCAA GAACATCGTC
GGCATCGTGC TTCAGTGCAA CAACTACGAG GTGATCGACC TCGGCGTGAT GGTGCCGGCC
GCCAAGATCA TCGAGACGGC GAAGGCTGAG AAAGCCGATA TCGTCGGCCT CTCCGGCCTG
ATCACGCCGT CGCTGGACGA GATGGGCTAT TTCGCGGCGG AGCTTGAGCG TCAGGGGCTC
AACCTGCCGC TCCTGATCGG CGGCGCGACC ACCAGCCGCG TCCATACCGC CGTGAAGATC
GATCCCAACT ATCGCAATGG TCCGGTGATC CATGTCAATG ACGCCAGCCG CGCCGTCGGC
GTCGTCGCCT CGCTGATGTC GCCGGAGCGG CGGGAGGCTT ACGCGGCCGG CGTGCGCGCC
GAATACGCCA AGATTTCCGC GGCGCATTTC CGCGCCCAGC AGGACAAGAA ACGGCTGCCG
CTCGCGGCCG CCCGCGCCAA CGCGGTGCCG ATCGACTGGA GCAGCTACCG CCCGGTCAAG
CCGACATTTC TCGGAACCAA GGCCTTCGCC GACTATCCGC TGGAGGAACT GGTGGAGGTG
ATCGACTGGA CCCCGTTCTT CCAGGTGTGG GAGTTGGCGG GACGCTTTCC GGCGATCCTT
GACGACAAGG TGGTGGGCGA AACCGCCCGC GCCCTCTATG ACGACGCGCG AAAGATGCTG
GATCGGATCG TCAAGGAGAA ATGGTTCACC GCCTCTAGCG TGATCGGCTT CTGGCCCGCC
AACCGCATCG GCGACGATAT CGCCGTCTAT AGCGACGAAA GCCGCACCAC GCAGATCGCG
ACCTATCACA CCCTGCGCCA GCAACTTGAA AAGCGCGAGG GCCGTCACAA CGCCGCGCTG
GCGGACTTCA TCGCGCCGAA GGAGACCGGC ATCGCCGACT ATATCGGCGG TTTCGCCGTC
ACCGCCGGGC TCGGCGAGGA TGAAATCGCG GCGCGCTTCA AGAACGCCAA TGACGACTAT
TCATCCATTC TGGTGAAGGC GCTGGCCGAC CGCCTCGCGG AAGCCTTCGC GGAACGGATG
CATCAGCGCG TGCGAACGGA ATTCTGGGGC TACGCGCCGG ATGAGGCGTT GACCAACGAT
CAGCTCATCC GGGAAGAGTA TGTCGGCATC CGCCCCGCAC CCGGTTATCC GGCGCAGCCC
GACCATACCG AGAAGGCCAC GCTGTTCCGC CTGCTGGACG CGACGCGCGC GACCGGCGTC
GAACTGACCG AGAGCTTTGC GATGTGGCCG GGGTCCTCGG TCTCCGGTCT CTATTACAGC
CATCCCGAGA GTCAGTATTT CGGTGTCGGC AAGATCGAGC GCGATCAGGT CGAGGACTAT
GCCGCGCGCA AAGGGATGGA GGTCGCCGAG ATCGAGCGCT GGCTGGCGTC GATCCTCAAC
TACATTCCGG GTCAGGATGC TTCCGGAAAG CCCGCAACGA CGCCGGTCCC CGCGCCCGCC
AACGACGCCT CCGCCGACGT CGCCAATCAT CCGCCGGGCT GCCAGTGCGC GGTCCATCTG
CGGCTTCGCA AGACCACGGC GCGGGCGGGC TGA
 
Protein sequence
MTRVTKSSNT IADKFRALAR ERILVLDGAM GTMIQNRGFD EAAFRGERFK NFHRDVRGNN 
DLLILTQPQA IEDIHAQYLR AGADLVATNT FSSTSIAQAD YDMSDLVYEL NREGAKLARS
AAEKVSAEDG KPRFVVGAIG PTNRTASISP DVANPGYRAV TFDDLRKSYG EQINGLLDGG
ADLLLVETIF DTLNAKAALY AIAEIGEQRG IDIPVMVSGT ITDKSGRLLS GQLPEAFWHS
VRHAGPITIG FNCALGAEDL RAHVAEIGRV ADTLVCAYPN AGLPNEFGEY DESPDYMARL
IGEFAQAGLV NVVGGCCGTT PDHIAAIAAA VAPHKPRVVP VIEPRLRLSG LEPFSLTSDI
PFVNVGERTN VTGSAKFRNL IKAGDYAAAL DVARNQVENG AQIIDVNMDE GLLDSEAAMV
TFLNLIAAEP DIARVPVMVD SSKFSVIEAG LKCLQGKPVV NSISLKEGEE KFLHEARIAR
RHGAAVVVMA FDEQGQADTC QRKMEICKRA YDILVEQVGF PPEDIIFDPN IFAIATGLEE
HNNYGVDFIE ATRWIRQNLP HAHISGGVSN LSFSFRGNEP VREAMHSVFL YHAIKAGMDL
GIVNAGQMVI YDDIDPELRQ VCEDVVLNRD PDAGERLLNL AEKFRGQGKQ AKEADLSWRE
WPVEKRLSHA LVNGITEYIE QDTEEARKSA DRPLSVIEGP LMAGMNVVGD LFGDGKMFLP
QVVKSARVMK HAVAYLMPFM EEEKARNQAA GIEGAGSTSA GKILLATVKG DVHDIGKNIV
GIVLQCNNYE VIDLGVMVPA AKIIETAKAE KADIVGLSGL ITPSLDEMGY FAAELERQGL
NLPLLIGGAT TSRVHTAVKI DPNYRNGPVI HVNDASRAVG VVASLMSPER REAYAAGVRA
EYAKISAAHF RAQQDKKRLP LAAARANAVP IDWSSYRPVK PTFLGTKAFA DYPLEELVEV
IDWTPFFQVW ELAGRFPAIL DDKVVGETAR ALYDDARKML DRIVKEKWFT ASSVIGFWPA
NRIGDDIAVY SDESRTTQIA TYHTLRQQLE KREGRHNAAL ADFIAPKETG IADYIGGFAV
TAGLGEDEIA ARFKNANDDY SSILVKALAD RLAEAFAERM HQRVRTEFWG YAPDEALTND
QLIREEYVGI RPAPGYPAQP DHTEKATLFR LLDATRATGV ELTESFAMWP GSSVSGLYYS
HPESQYFGVG KIERDQVEDY AARKGMEVAE IERWLASILN YIPGQDASGK PATTPVPAPA
NDASADVANH PPGCQCAVHL RLRKTTARAG