| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0254 |
|---|
| Symbol | |
|---|
| ID | 3674160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 283688 |
|---|
| End bp | 286045 |
|---|
| Gene Length | 2358 bp |
|---|
| Protein Length | 785 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637711793 |
|---|
| Product | helix-turn-helix, Fis-type |
|---|
| Protein accession | YP_316873 |
|---|
| Protein GI | 75674452 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTC AGACCATCCC CTTGCAATCC ATCCTGCCGC CGCAGGGCAA CCCGCGCAGT
GCGTTCGACC CCGCGACCAT CGAGGGGCTT GCCGCCAGCA TCCGGCAGGA CGGCCTCTTG
CAGAATCTTG TCGTCAGGCC GAGCCGGGGC AGGCAGTTTC GCATCGTCAG CGGCGAGCGG
CGTTACCGCG CCTTGAAGCT GTTGCAGGAG CGCGGCGACA TCGCGGAGGA TTTCGGCGTC
ACCGTCGAAA TCCGCAGCAA GCTCAGCAAA GACGATGCGC TGCGCCTTGC GACCGTCGAG
AACGTGCAGC GAGAGAATTT GCCGCCGCTC GATGAGGCGG CGGCGTTCGC CGCGCTCATT
CGCAAGGGCG CAAGCCTTGA TGATCTTGCC GCGAAGACGG GTCTTTCCCA CACGACCATC
AGGCGGCGGC TGGCGCTGAA CGATCTGTGC AGGGAAGCGA AGGAAGCGCT GGCGGCGGGA
ACGATCACCC TTGCGCAAGC CGAAGCGCTG ACGCTCGGTG ATGCGGACGC GCAGCGCAGC
GTGCTGGGCG ACTTGGAGAG CGGGTACGTC CCCTACAGCG CCGCCGATAT TCGCGACCAT
CTTCTCGATG AGCGTCCGAG CGTGGCCATG GCAATCTTTC CGGTGGAGCA GTACACCGGG
ACGATCACGA CCGACCTGTT TGCCGATGAC GAGGAAAGCT ACTTCGACGA TGCCGATCAG
TTCCTTGAAT TGCAGCGGCA GGCGGTGGAG AAGCTCGCGA CTGAGTACGC AGGCAAGGCG
GCGTGGGTGG AAGTGACCGA AGCGCACCGC ATCCCCGCTT GGCAGTACGA AGAAGCGGAA
GATGGCGAGC AGGGCGGCGT TCTCATCAAC CTCGCGCCGT CAGGCCGCGT CGAAATTCGC
GAGGGGCTTG TCTCTCCCGC CTGTCCGCCG TCAGGGCTCT TGAGACAGTT TAGGAGTTTT
CGGGAAGGGA GGATTTCTGG ATCATCGCAG CCAATTTGGA GCGCAGATGA GACAGAAATC
CGGACCAGGC AAAGCGCCGG CAGAACAGGT GCTGAAGGAC ATCCGACGGC AGACGCGCCG
GCATTATTCG GCGGAGGAGA AGATCCGTAT CGTGCTGGAA GGACTGCGCG GCGAGGAGAA
CATCTCCGAG CTTTGCCGCC GCGAAGGCAT CGCCGCCTCG ATGTATTACG GTTGGTCCAA
GGAGTTCCTG GAAGCCGGCA AGCGCCGGTT GGCGGGCGAC ACGGCACGTG CCGCAACCTC
TGGCGAGGTG AAAGATCTTC GTCGGGAAGC CTCGGCGTTG AAGGAAGTCG TCGCCGATCT
CACCCTGGAG AACCGTCTGC TAAAAAAAAG CATGAACGGG GATGGGGAGA ACGAGGCATG
AGGTATCCTG CGTCCGAGAA AGCCGAGATC ATCGCGTTGG TGGAGCAGTC GCATTTGCCG
GCCAAACGCA CGCTGGACAA GCTCGGCATC CCCCGCGCCA CGTTTTATAG ATGGTACGAT
CGCTACCGCG CGGGCGGCAT TGAGGCCCTG GCAGATCACC GCTCTCGACC GGATCGGGTC
TGGAATCGTA TCCCGGATGA CGTCCGCGGC CAGATCATCG ACCTGGCATT GGAGCTTCCG
GAACTATCGC CGCGAGAGCT CGCCGTGCGG TTTACCGACG AGAGAAAGTA CTTTGTCTCG
GAGGCTTCGG TCTATCGGCT GCTGAAGGCG CACGACCTCA TCACCAGTCC GGCCTATGTA
GTGATCAAGG CGGCGAACGA GTTCAAGGAC AAGACCACCG CCGCCAACCA GCTCTGGCAG
ACCGACTTCA CCTACCTGAA GATCACCGGC TGGGGCTGGT ACTATCTATC GACGGTGCTC
GACGACTTCT CGCGCTACAT CGTCGCCTGG AGGTTAGGTC CCACGATGTG TGCCTCCGAC
GTCACGGCTA CGCTCGATCA GGCACTGGCC GCCTCTGGTC TGGATCACGT CAGCGTCAGG
CAGCGGCCCC GGCTTCTCAG CGACAATGGT TCGAGTTACG TCGCGGATGA TCTGGCCACG
TGGCTCAGGG CCAAGGACAT GCAGCATGTG CGCGGAGCGC CGTATCATCC TCAGACTCAG
GGCAAGATCG AGCGTTGGCA TCAAACGTTG AAGAACCGCA TCCTGCTTGA GAACTACTAT
TTACCGGACG ACCTCAAACG TCAGGTCGCC GCGTTCGTCG AACACTATAA TCATGACCGC
TACCACGAGA GCATCGGCAA CGTTACACCT GCCGACGTCT ACTTCGGCAG GGCTGAGACA
ATCCTCGCCG AACGACACCG CATCAAGCGC GACACCATCG CAAACCGTCG CTTGCAGCAT
CAGCTGCAGG CCGCTTAA
|
|---|
| Protein sequence | MSIQTIPLQS ILPPQGNPRS AFDPATIEGL AASIRQDGLL QNLVVRPSRG RQFRIVSGER
RYRALKLLQE RGDIAEDFGV TVEIRSKLSK DDALRLATVE NVQRENLPPL DEAAAFAALI
RKGASLDDLA AKTGLSHTTI RRRLALNDLC REAKEALAAG TITLAQAEAL TLGDADAQRS
VLGDLESGYV PYSAADIRDH LLDERPSVAM AIFPVEQYTG TITTDLFADD EESYFDDADQ
FLELQRQAVE KLATEYAGKA AWVEVTEAHR IPAWQYEEAE DGEQGGVLIN LAPSGRVEIR
EGLVSPACPP SGLLRQFRSF REGRISGSSQ PIWSADETEI RTRQSAGRTG AEGHPTADAP
ALFGGGEDPY RAGRTARRGE HLRALPPRRH RRLDVLRLVQ GVPGSRQAPV GGRHGTCRNL
WRGERSSSGS LGVEGSRRRS HPGEPSAKKK HERGWGERGM RYPASEKAEI IALVEQSHLP
AKRTLDKLGI PRATFYRWYD RYRAGGIEAL ADHRSRPDRV WNRIPDDVRG QIIDLALELP
ELSPRELAVR FTDERKYFVS EASVYRLLKA HDLITSPAYV VIKAANEFKD KTTAANQLWQ
TDFTYLKITG WGWYYLSTVL DDFSRYIVAW RLGPTMCASD VTATLDQALA ASGLDHVSVR
QRPRLLSDNG SSYVADDLAT WLRAKDMQHV RGAPYHPQTQ GKIERWHQTL KNRILLENYY
LPDDLKRQVA AFVEHYNHDR YHESIGNVTP ADVYFGRAET ILAERHRIKR DTIANRRLQH
QLQAA
|
|---|
| |