Gene Nwi_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0229 
Symbol 
ID3674679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp259851 
End bp261269 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content64% 
IMG OID637711768 
Productthreonine synthase 
Protein accessionYP_316849 
Protein GI75674428 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCACT ATCTTTCGAC ACGGGGAGAG AATCAAAAAC TCGGTTTCTC TGATGTGATG 
CTGGCCGGAC TCGCACGGGA CGGCGGTCTC TACGTGCCGG AGGTCTGGCC GCAATTGCGG
CTCGATACGG TTGCCGCCTT TTTCGGCAGG CCCTACTCGG AGGTAGCCGT TGAGGTGATC
CGGCCGTTCG TGGGCGGAGA TATCGCCGAC GTCGACCTCG CTCGCATGGC CAACGAGGCT
TATGCGACCT TCCGGCACCC CGCGGTGGTC CCGCTCGATC AGATAGGCTC TCAACAGTTC
CTGCTGGAAC TGTTTCACGG TCCGACGCTG GCGTTCAAGG ACGTGGCGAT GCAGTTGCTG
TCGCGGCTGA TGGACCACGT TCTGGCGAGA CGCGGCCAGC GCACCACCAT CGTCGTGGCC
ACCTCGGGTG ACACCGGCGG CGCGGCAGTG GATGCATTCG CCAACCGTGC GAATGTTGAT
CTGATCGCCT TGTTCCCGGA CGGCCGCATT TCCGAGGTGC AGCGACGCAT GATGACGACG
ACGGCCGCGC CGAATGTTCA TGCGCTTGCG GTCAAGGGCA CGTTCGACGA CTGCCAGGCG
ATCGTGAAGG GCCTGTTCAA CAATCACCGC TTCCGCGACG AGGTATCGCT CTCGGGAGTC
AACTCGATCA ACTGGGCGCG GATCGTTGCA CAGGTAGTGT ATTACTTCAC CTCTGCGGTC
GCGCTCGGCG CGCCCGCGCG CGCCGTTGAT TTTACCGTGC CGACCGGTAA TTTCGGCGAC
ATCTTCGCCG GTTACGTCGC AAAGCGCATG GGACTGCCGG TACGCCGGCT GCGGATCGCC
GCCAACATCA ATGATATTCT GCCGCGCACG CTGAAGACCG GAATTTATGA GGTGCGCGAG
GTTCACGCCA CCTCTTCGCC GTCGATGGAC ATTCAGGTGT CGTCGAACTT CGAACGGCTG
TTGTTCGAGG CGACCGGGCG TGATGCCGCG CAGGTGCGTG CGCTGATGGC CTCGTTGCAG
CAGTCCGGCC GTTTCGCGCT ACCGGAGTCG GTTCTGGCCG CGATGCGCGC GGATTTCGAT
GCCGAATGTG CCGACGAAAC GGAGACCGCG GCCACGATCC GCACGGCGTG GCGCGAAGCC
GGAGATCTGC TCGACCCGCA TACGGCTGTT GCCTTGACGG TGGCCGATCG TGACGCGGCG
GAGTCGCGCG TTCCCAACAT CGTGCTCGCC ACCGCCCATG CCGCCAAGTT CCCTGACGCC
GTTGAGGCGG CCTGCGGCGT ACGGCCGCCG TTGCCGGCCT GGCTCGACGG CTTGATGACC
CGGCCCGAGC GGATCACGAT CGTGAACAAC GATCAGGCAG AAATCGAACG GTTCGTGCTG
TCCGTCAGCC GCGCCGCCAA TCACGGAGTT ACCGGATGA
 
Protein sequence
MTHYLSTRGE NQKLGFSDVM LAGLARDGGL YVPEVWPQLR LDTVAAFFGR PYSEVAVEVI 
RPFVGGDIAD VDLARMANEA YATFRHPAVV PLDQIGSQQF LLELFHGPTL AFKDVAMQLL
SRLMDHVLAR RGQRTTIVVA TSGDTGGAAV DAFANRANVD LIALFPDGRI SEVQRRMMTT
TAAPNVHALA VKGTFDDCQA IVKGLFNNHR FRDEVSLSGV NSINWARIVA QVVYYFTSAV
ALGAPARAVD FTVPTGNFGD IFAGYVAKRM GLPVRRLRIA ANINDILPRT LKTGIYEVRE
VHATSSPSMD IQVSSNFERL LFEATGRDAA QVRALMASLQ QSGRFALPES VLAAMRADFD
AECADETETA ATIRTAWREA GDLLDPHTAV ALTVADRDAA ESRVPNIVLA TAHAAKFPDA
VEAACGVRPP LPAWLDGLMT RPERITIVNN DQAEIERFVL SVSRAANHGV TG