Gene Nwi_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0222 
Symbol 
ID3676679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp253282 
End bp253869 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content65% 
IMG OID637711761 
Productinvasion associated locus B 
Protein accessionYP_316842 
Protein GI75674421 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAA GCAGAGGATC GACCCGGATG GAGGCTTCTA AGCAGCATAT CGGATATGCA 
TCTTCTTCGC GCAGGACGGC CCGGCGTCAG CCGCTCCGTA TTCTGGCGTG CGGGGCCGCC
GCACTTCTGG TTGCCGGCTT TGCCAGCGCG GCCAAGGCCC AGGGAGCCGT CAAATCGGTT
CACGGCGACT GGCAGATCCG CTGCGACACC CCTCCCGGCG CGAAGGCCGA ACAATGCGCC
CTGATCCAGA GCGTGGTGGC CGAAGACCGC TCCAATGCCG GGCTGACGGT GATCGTGCTC
AAGACCGCCG ACCAGAAAAG CCGCCTGATG CGCGTGGTGG CGCCACTCGG CGTGTTGCTG
CCCTCCGGCC TCGGACTGAA GCTCGACAAT GCCGACGTCG GCCGCGCCGG TTTCGTGCGC
TGCCTCCCCA ACGGCTGCGT CGCCGAGGTG GTTCTGGATG ACAAGCTGCT TGGACAGTTG
CGCAGCGCGA AGACGGCGAC ATTCATCATC TTTGAAACGC CCGAGGAAGG CATCGGCTTT
CCGCTCAGCC TGAACGGGCT CGGCGAAGGT TACGATAAGC TGCCCTGA
 
Protein sequence
MVESRGSTRM EASKQHIGYA SSSRRTARRQ PLRILACGAA ALLVAGFASA AKAQGAVKSV 
HGDWQIRCDT PPGAKAEQCA LIQSVVAEDR SNAGLTVIVL KTADQKSRLM RVVAPLGVLL
PSGLGLKLDN ADVGRAGFVR CLPNGCVAEV VLDDKLLGQL RSAKTATFII FETPEEGIGF
PLSLNGLGEG YDKLP