| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0209 |
|---|
| Symbol | |
|---|
| ID | 3676665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 239509 |
|---|
| End bp | 240858 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637711747 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_316829 |
|---|
| Protein GI | 75674408 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCTTT CCGGCCAGAC CATGCCGCTC GAGGCGCGAA AATGTCAGTC ATTGACCGGG
CGCGTCAGGG TGCCCGGGGA TAAATCGATC TCCCACCGCG CGCTGATCCT GGGCGCGCTG
GCGGTCGGCG AAACCCGAAT CTCCGGCCTT CTCGAGGGCG AGGACGTACT CAACACCGCG
AAGGCGATGC AGGCGCTGGG TGCGAAGGTC GAACGGCGGA CCGATGATAA TGGCGGGATC
GCCTGGTCGG TGCGCGGCGT CGGCACCGGC GGATTTGCGA CGCCGGAAGC GCCGCTCGAT
TTCGGCAATT CAGGCACGGG ATGCCGCCTG GTGATGGGCG CGGTGGCCGG CTGCCCGATC
CGCGCCGCCT TCGATGGCGA TGGATCGCTG CGCTCGCGGC CGATGCGCCG AATTCTCGAT
CCGCTGGAGT TGATGGGTGC GCGGGTGATC TCGCAAAGCG ACGGCGGCCG CCTGCCGCTG
ACGCTCGAAG GCGCGCGTGA TCCGCTGCCG ATCGTGTACC GCACGCCGGT GGCTTCGGCG
CAGATCAAAT CGGCGGTGCT GCTGGCGGGG CTGTCGGCTC CGGGCGTCAC CACCGTCATC
GAGCGCGAGG CCAGCCGGGA CCATACCGAA CTGATGCTGA AGCATTTTGG CGCCGATATC
GTCTCCGTGG CCGAGGGCGC GCATGGGCGC AAAATCTCGC TGACCGGACA GCCCGAGTTG
CACGGGGCAG GGGTCACGGT GCCGGCCGAC CCGTCATCGG CGGCGTTTCC GATCGTTGCC
GCGCTGATCA CGGAAGGCTC CGACATCGTG CTGGACGACG TGATGACAAA CCCGTTGCGA
ACCGGCCTGT TTGTCACGCT GCGCGAGATG GGTGCGTCGA TCGAGGAAAG CGAAACGCGC
CTTGATGCCG GCGAGCCGAT GGCGCAGCTG CGCGTGAAGG CGTCCCGGCT GCGCGGGATC
GAGGTGCCGG CGGAGCGCGC CCCCTCGATG ATCGACGAGT ATCTCGTGCT CGCGGTCGCG
GCGGCGTTTG CCGAAGGCAC CACCGTGATG CGCGGCCTGC GCGAATTGCG GGTCAAGGAA
TCCGACCGCC TCGAGGCTGC CGCCGCGATG CTGCGCGCGG GCGGCGTCGC GGTCGAGATC
GCCGGCGACG ACCTCATCGT CGAGGGCCGC GGCCGGGTGC CCGGCGGCGG TCTCGTCACC
ACCCACATGG ATCATCGCAT CGCGATGTCG GCGCTGGTGA TGGGCTGCGC CTCGGACGCG
CCGGTCAAGG TCGACGACAT CGCCTTCATC GCCACGAGTT TCCCCGATTT CGTGCCGATG
ATGCAGCGGC TGGGAGCAAA TTTCGCATGA
|
|---|
| Protein sequence | MTLSGQTMPL EARKCQSLTG RVRVPGDKSI SHRALILGAL AVGETRISGL LEGEDVLNTA
KAMQALGAKV ERRTDDNGGI AWSVRGVGTG GFATPEAPLD FGNSGTGCRL VMGAVAGCPI
RAAFDGDGSL RSRPMRRILD PLELMGARVI SQSDGGRLPL TLEGARDPLP IVYRTPVASA
QIKSAVLLAG LSAPGVTTVI EREASRDHTE LMLKHFGADI VSVAEGAHGR KISLTGQPEL
HGAGVTVPAD PSSAAFPIVA ALITEGSDIV LDDVMTNPLR TGLFVTLREM GASIEESETR
LDAGEPMAQL RVKASRLRGI EVPAERAPSM IDEYLVLAVA AAFAEGTTVM RGLRELRVKE
SDRLEAAAAM LRAGGVAVEI AGDDLIVEGR GRVPGGGLVT THMDHRIAMS ALVMGCASDA
PVKVDDIAFI ATSFPDFVPM MQRLGANFA
|
|---|
| |