Gene Nwi_0197 details

Gene Information

• Locus tag: Nwi_0197
• Symbol: dnaK
• ID: 3676653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter winogradskyi Nb-255
• Kingdom: Bacteria
• Replicon accession: NC_007406
• Strand: +
• Start bp: 227144
• End bp: 229036
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637711735
• Product: molecular chaperone DnaK
• Protein accession: YP_316817
• Protein GI: 75674396
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.432012
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAAAGG TCATTGGGAT CGACCTCGGC ACCACTAATT CGTGCGTGGC GGTAATGGAC 
GGCAAGACGC CGAAAGTCAT CGAGAACGCG GAAGGGATGC GGACCACGCC GTCCATCGTC 
GCCTTTAGCG ATGATGGCGA GCGTCTCGTC GGGCAGCCGG CCAAGCGCCA GGCTGTGACC 
AATCCCGAGC GGACCATTTT CGCCGTCAAG CGCCTGATCG GCCGCCGCTA CGACGACCCC 
ACGGTTGAAA AGGACAAGCA GCTTGTCCCT TACAAGATCG CGAAAGCCGG CAACGGCGAC 
GCCTGGGTCG AGGCCGATGG CAAAACCTAT TCGCCCTCGC AGATTTCGGC CTTCACGCTT 
CAGAAGATGA AGGAGACCGC CGAGGCTCAT CTCGGTCAGA AGGTCGATCA GGCCGTCATC 
ACCGTGCCCG CCTACTTCAA CGACGCGCAA CGTCAGGCGA CCAAGGACGC CGGCAAAATT 
GCCGGCCTCG AAGTGCTGCG CATCATCAAC GAGCCGACCG CGGCCGCGCT CGCCTACGGC 
CTCGACAAGT CGAAGGCCGG CACCATCGCG GTATATGATC TCGGCGGCGG CACGTTCGAC 
GTGTCGGTTC TCGAGATCGG CGACGGCGTG TTCGAGGTGA AGTCGACCAA CGGGGATACC 
TTCCTCGGCG GCGAAGACTT CGACATGCGT CTGGTCAACT ATCTCGCGGA CGAATTCCAG 
AAGGAGCAGG GCATCAACCT GCGCAACGAC AAGCTGGCCT TGCAGCGGTT GAAGGAAGCC 
GCCGAGAAAG CGAAGATCGA ACTGTCGTCG ACCACGCAGA CCGAGATCAA TCTGCCGTTC 
ATCACGGCCG ACCAGTCCGG CCCGAAGCAT CTGACGATGA AGCTCACACG CGCCAAGTTC 
GAGGCGCTGG TCGATGATCT CGTTCAGAAG ACGATCGAGC CGTGCCGCAA GGCGCTGAAG 
GATGCCGGCC TGACGGCGGG GGAGATCGGC GAAGTGGTGC TGGTCGGCGG CATGACGCGC 
ATGCCGAAGG TCCAGGAAGT GGTCAAGCAG TTGTTCGGCA AGGAGCCGCA CAAGGGCGTC 
AACCCGGACG AGGTTGTCGC GATCGGCGCG GCGATCCAGG CCGGCGTACT GCAGGGCGAC 
GTCAAGGACG TGCTGCTGCT CGACGTCACT CCGCTGTCGC TGGGCATCGA GACGCTGGGC 
GGGGTGTTCA CCCGCATCAT CGACCGCAAT ACCACGATCC CGACCAAGAA AAGTCAGGTG 
TTCTCGACAG CCGAGGATAA CCAGAACGCC GTCACCATTC GCGTCTTCCA GGGCGAACGT 
GAAATGGCGG CGGACAACAA GATCCTCGGC CAGTTCGATC TGATGGGCAT TCCGCCCGCT 
CCGCGCGGTA TGCCCCAGAT CGAGGTGACG TTCGACATCG ACGCCAACGG CATCGTCAAC 
GTTTCCGCCA AGGACAAGGC GACCGGCAAG GAACAGCAGA TCCGCATCCA GGCCTCGGGC 
GGCCTGTCGG AGGCCGACAT CGAGAAGATG GTCAAGGACG CGGAAGCCAA CGCCGCCGAG 
GACAAGAAGC GCCGCGAGGC CGTGGACGCC AAGAATCAGG CCGACAGCCT GGTGCATTCG 
ACCGAGAAGG CGCTTACCGA ACACGGCTCG AAGATCGAGG AAAGCGAACG CCGCGCGATC 
GAGGATGCGG TCAGCGATCT GAAGGAAGCG CTCAAAGGCG ACGATGCCGA GGCGATCAAG 
GCCAAGACCA ACACGCTGGC GCAGGCCTCC ATGAAGCTAG GCGAGGCGAT GTATAAACAA 
CAGGCGGAAG CCGATGCCGC CAAGGACGCC GCGAAGGACG ATGTCGTCGA TGCGGAATTT 
ACCGAGGTCG ACGACGACAA GAAGTCGGCT TAA 

 

Protein sequence

MGKVIGIDLG TTNSCVAVMD GKTPKVIENA EGMRTTPSIV AFSDDGERLV GQPAKRQAVT 
NPERTIFAVK RLIGRRYDDP TVEKDKQLVP YKIAKAGNGD AWVEADGKTY SPSQISAFTL 
QKMKETAEAH LGQKVDQAVI TVPAYFNDAQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG 
LDKSKAGTIA VYDLGGGTFD VSVLEIGDGV FEVKSTNGDT FLGGEDFDMR LVNYLADEFQ 
KEQGINLRND KLALQRLKEA AEKAKIELSS TTQTEINLPF ITADQSGPKH LTMKLTRAKF 
EALVDDLVQK TIEPCRKALK DAGLTAGEIG EVVLVGGMTR MPKVQEVVKQ LFGKEPHKGV 
NPDEVVAIGA AIQAGVLQGD VKDVLLLDVT PLSLGIETLG GVFTRIIDRN TTIPTKKSQV 
FSTAEDNQNA VTIRVFQGER EMAADNKILG QFDLMGIPPA PRGMPQIEVT FDIDANGIVN 
VSAKDKATGK EQQIRIQASG GLSEADIEKM VKDAEANAAE DKKRREAVDA KNQADSLVHS 
TEKALTEHGS KIEESERRAI EDAVSDLKEA LKGDDAEAIK AKTNTLAQAS MKLGEAMYKQ 
QAEADAAKDA AKDDVVDAEF TEVDDDKKSA