Gene Nwi_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0189 
Symbol 
ID3676645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp218552 
End bp219475 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID637711727 
Productheat shock protein HtpX 
Protein accessionYP_316809 
Protein GI75674388 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.160092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.264945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATT TTCGTACTGC GATCCTGCTG GCGGGCCTCA CCGGCCTGTT CATGGGCGTG 
GGCTATCTGA TCGGCGGCGC CAGCGGCGCG ACGATCGCGC TCGTCGTCGC GGCCGCGACC
AACCTCTTCG CCTATTGGAA CTCCGACCGC ATGGTGCTGT CGATGTATGG CGCACATGAG
GTCGACCCCG GAACCGCGCC CGACCTGCAC CGGCTGGTGG CCGAGTTGGC TTCGCGCGCC
GGCCTGCCGA TGCCGCGGGT GTTCGTCATG GACAATCCGC AGCCCAACGC GTTCGCCACC
GGCCGCAATC CGGAGAATGC CGCCGTGGCG GTGACGACGG GGCTCATGCA GTCGCTGAGC
CGCGAGGAAC TGGCCGGCGT GATCGCGCAT GAGCTTGCCC ACATCAAGCA TCACGACACG
CTGCTGATGA CCATTACCGC AACCATCGCC GGCGCGATCT CGATGCTGGC GCAATTCGGC
ATGTTCTTCG GCGGCAACCG CGACAATCAC GGCCCCGGCA TCATCGGCTC ACTGGCGATG
ATGATCCTCG CGCCGTTCGG AGCCATGCTG GTGCAGATGG CGATCAGCCG CACGCGCGAA
TACGCCGCCG ACGAAATGGG CGCTCGCATC TGCGGCCAGC CGATGTGGCT TGCCTCGGCG
CTGGCCAGGA TCGAGAATGC CGCGCATCAG GTACCAAACA TGGAGGCGGA ACGCGCGCCC
GCGACCGCGC ACATGTTCAT CATCAACCCG CTGTCGGGGC GCGGCATGGA CAACCTGTTC
GCGACCCATC CCTCGACTGA AAACCGCATC GCGGCATTGC AGAGGCTCGC CGGACAGTCC
GGCGGTGGTC TTGCCCCGGG CGGCCCGCCG CCCGACCCGA GCAGCCCCTG GAACAAGGGT
TCTCGCCGCG GTCCATGGGG TTGA
 
Protein sequence
MNYFRTAILL AGLTGLFMGV GYLIGGASGA TIALVVAAAT NLFAYWNSDR MVLSMYGAHE 
VDPGTAPDLH RLVAELASRA GLPMPRVFVM DNPQPNAFAT GRNPENAAVA VTTGLMQSLS
REELAGVIAH ELAHIKHHDT LLMTITATIA GAISMLAQFG MFFGGNRDNH GPGIIGSLAM
MILAPFGAML VQMAISRTRE YAADEMGARI CGQPMWLASA LARIENAAHQ VPNMEAERAP
ATAHMFIINP LSGRGMDNLF ATHPSTENRI AALQRLAGQS GGGLAPGGPP PDPSSPWNKG
SRRGPWG