Gene Nwi_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0166 
Symbol 
ID3675779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp193564 
End bp194625 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content69% 
IMG OID637711703 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_316786 
Protein GI75674365 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCT GGACGGCCCG CCGGTTGACG TGCCGCGGAA CGGCGGAATA TCCCTTCTCT 
CGACCTGATA CCAACGCCTT TGAGGACCAG ATCATGGCAT CGAATTCGGA CACGCTCGTC
ACGGTTTTCG GAGGCTCGGG CTTCCTCGGC CGATATGTGG TGCGCGCGCT CGCCAAACGC
GATTACCGCA TCCGGGTCGG CGTCCGGCGG CCCGAACTGG CCGGGCATCT GCAACCGCTC
GGCAAGGTCG GCCAGATCCA TGCCGTCCAG GTCAATCTAC GCCATCCGGC GTCGGTCCGC
GCGGCCATGC GGGGGTCCGA AGTTGCCGTC AACCTGGTCG GCATCCTGAC CAAGAGCGGC
CGGCAGACGT TCGACGCCGT GGTGGCCAAA GGCGCGGCGA CCGTCGCGGA GACGGCCGCG
GCCGCCGGCG CGCGCCTGGT GCATGTTTCA GCGATCGGCG CCGACCCGGC ATCGGCATCG
GCCTACGCCC GCGCCAAGGC CTCCGGAGAA AAGGCGGTCC TGGCGGCGGT GCCGTCCGCG
ACCATCCTGC GGCCGTCGGT GATGTTCGGT CCCGAGGACC AGTTCGCCAA CCGGTTTGCG
GCGCTCGCGC TGATATCGCC CATGCTGCCG CTGATCGGCG GTGGCGCGAC CAGGATGCAG
CCGGTCCATG TCGGCGACGT CGCAACCGCC GTGGCCGACG CGGTCGACGG CAGAACCAAG
GCGGGCGCCG TCTATGAACT CGGCGGTCCC GACGTGCTCT CGATGCGCGA GATCATGCGG
ATCATCCTGC GCGTCATCGA GCGCGAGCGG ATGCTGGTGC CGGTGCCGTT CCTCATGGCC
CGCCTCATGG CAATGGGCCT GCAGTTCGCG CCGGGACCCC TGAAGCTGAC GCCGGACCAG
GTCGCGCTGC TCAGAACCGA CAACGTCGTT TCCAACACGG CGACGGCCGC GGGCCTCACG
CTGCAAGGAT TGGGCATCGC GCCGGACTCG ATGGAGGCCG TGGTGCCGCA ATATCTCTGG
CGCTTCCGCA AGGCCGGCCA GTTCGCGCCG AAGGGCGCGT GA
 
Protein sequence
MAGWTARRLT CRGTAEYPFS RPDTNAFEDQ IMASNSDTLV TVFGGSGFLG RYVVRALAKR 
DYRIRVGVRR PELAGHLQPL GKVGQIHAVQ VNLRHPASVR AAMRGSEVAV NLVGILTKSG
RQTFDAVVAK GAATVAETAA AAGARLVHVS AIGADPASAS AYARAKASGE KAVLAAVPSA
TILRPSVMFG PEDQFANRFA ALALISPMLP LIGGGATRMQ PVHVGDVATA VADAVDGRTK
AGAVYELGGP DVLSMREIMR IILRVIERER MLVPVPFLMA RLMAMGLQFA PGPLKLTPDQ
VALLRTDNVV SNTATAAGLT LQGLGIAPDS MEAVVPQYLW RFRKAGQFAP KGA