Gene Nwi_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0157 
Symbol 
ID3674173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp181625 
End bp183379 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content68% 
IMG OID637711694 
Productheparinase II/III-like 
Protein accessionYP_316777 
Protein GI75674356 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.901723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGTCG CTCATCGCAG ACGCATTTCA GCTCTGGTCG TCAGCCGTTT CGCGCGCCGG 
ACGATGGCGC GCGCCGGCGA CGGGCCTGCG GCGCTTTCGC GGCTATGGCC CGGCCGCGCC
GACCGCCTGA CCATCGCGCC GCACGACCTT CGGACGGCCG ACGCCACCCG CGCCGCCGAG
ATCTATGCCG GCCGCTTCGT GTTCGCGGGC AAGATCGTCA CCTGTCACTC CCGCTCGGTC
TTCGACCTCG AACCGCCGTC CGAGGACTGG GAAGCCGCGC TGCTGGGCTT TGGCTGGCTG
CGGCATCTGC GCGCCGCCGA CACCGCGATC ACCCGCGCCA ACGCGCGATC GCTGGTAGAG
GACTGGATCT CGAATCCGGC GCGCAGGCGG CCGGCGTGCC GGCGCGCCGA CGTCATGTCG
CGGCGCGTGA TCTCGCTGCT GTCGCAGGCC CCGCTCGTGC TCGGCGAGGC GGACGGAAAG
TTCTATCGCC GCTATCTGCG CGCGCTTGCC CGTGACATCC GCCTGCTTCG CTTTGGTTTG
CACGATGCTC CTGACGGGGT GTCACGGCTG CAGGTCGTGA TCGCGTTGTG TTACGCTTCA
CTGTGCCTTG CCAACCAGGC CCGCACCATC CGCAGCGCGA CCCGCAAGCT CTCCGAGGAA
CTGCGGCGGC AGATCCTGCC CGACGGCGGT CATGTCTCGC GCAATCCCGG CGCCCTGATC
GAACTGCTGA TCGACTTGCT CCCGCTGCGG CAGACCTTCG CCGCGCGCAA CATCGCGCCG
CCGCCGGCGC TCTTGAACGC CATCGACCGC ATGATGCCGA TGCTGCGCTT CTTCCGCCAC
GGCGACGGCA GCTTCGCGCT GTTCAACGGC ATGAGCAGCA CGCCGTCCGA CCTTCTGGCG
ACGCTCCTCG CCTATGACGA CACCCGCGGC ATACCGATGG CCAGCATGCC GCATACGGGC
TTTCAGCGGA TCGACGCCGG CGCGACGATC CTGATCGTCG ATGCCGGGCT GCCGCCGCCG
CCGAACCTCA GCGAGGAAGC TCATGCGGGC TGCCTGTCGT TCGAGCTGTC CTCCGGACTG
AACCGGATCG TCACAAATTG CGGAATGTCC TCGACCGGAC GCGACACATG GCGCGTGTTC
GCGCGCTCGA CAGCCGCGCA CTCCACGCTG GTCTGCCATC AGACATCCTC GTGTCAGTTC
GTCGAACAGT CGGCGATGAA GCGGCTGCTC CAGGGGGCGC CGATCGTCAG CGGTCCGGCC
CATGTCGAAA GCCTTCGCGA AACCATCGAC GGCGGCGAGC GGCTGACGGC TTCGCATGAC
GGTTATCTCG CGCGGTTTGG CCTGATCCAC CGACGCGTGC TGACGATGGC GCATGACGGC
TCGCGGCTGG AGGGCGAGGA CATGCTGGAG CCGGCCCCCG GCGGCCGCAT CAAGGGCAGC
CAGATTCGTT ACGCATTGCG GTTTCACCTG CATCCGTCCG TGAAGGCCAC TCGCCTCGAT
GATGCGCATG GGGTGATGCT GGTGTTGCCG AACCGTGAGG TCTGGACGTT CGAGGCGACT
CAAGACCGGG TCGAGCTTGA GGACAGCGTT TTTCTCGCCG GCAACGACGG TCCGCGGCGC
ACGGTGCAGA TCGTGATCCA CCAGAATGCG CGGGAAGTCT CACGGGTGCG CTGGGGTTTC
GTGCGCTCGG CCACCTCGGC CGCGGCCACC AATGCTCGCC GTCAGGCACG GCGCGAGCCG
GAATTGCCGC TGTAG
 
Protein sequence
MSVAHRRRIS ALVVSRFARR TMARAGDGPA ALSRLWPGRA DRLTIAPHDL RTADATRAAE 
IYAGRFVFAG KIVTCHSRSV FDLEPPSEDW EAALLGFGWL RHLRAADTAI TRANARSLVE
DWISNPARRR PACRRADVMS RRVISLLSQA PLVLGEADGK FYRRYLRALA RDIRLLRFGL
HDAPDGVSRL QVVIALCYAS LCLANQARTI RSATRKLSEE LRRQILPDGG HVSRNPGALI
ELLIDLLPLR QTFAARNIAP PPALLNAIDR MMPMLRFFRH GDGSFALFNG MSSTPSDLLA
TLLAYDDTRG IPMASMPHTG FQRIDAGATI LIVDAGLPPP PNLSEEAHAG CLSFELSSGL
NRIVTNCGMS STGRDTWRVF ARSTAAHSTL VCHQTSSCQF VEQSAMKRLL QGAPIVSGPA
HVESLRETID GGERLTASHD GYLARFGLIH RRVLTMAHDG SRLEGEDMLE PAPGGRIKGS
QIRYALRFHL HPSVKATRLD DAHGVMLVLP NREVWTFEAT QDRVELEDSV FLAGNDGPRR
TVQIVIHQNA REVSRVRWGF VRSATSAAAT NARRQARREP ELPL