Gene Nwi_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0111 
Symbol 
ID3675878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp130852 
End bp131406 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID637711647 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_316731 
Protein GI75674310 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0286945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCA CCCCCGACGT CTCCCCGCAA GCCGACCGCT CGCTGCTGAT CGTCGAGGAT 
GACAAACCGT TTCTGGAGCG TCTGTCGCGC GCCATGGAAA CGCGCGGCTT CAATGTGACC
CCATGCGACA GTGTCTCTGA TGGCCTTGCG CATATCGGAA AGTCTGCGCC GGCTTTTGCC
GTGGTCGATC TCCGGCTGGG CGACGGCAAC GGCCTCGACG TCGTATCCGC GCTTAAACGC
GAGCGCCCCG ATGCGAGGGC GATCGTGCTG ACCGGTTACG GCAACATCGC GACCGCTGTG
ACGGCGGTGA AGCTGGGCGC GATCGATTAC CTGTCCAAGC CTGCCGATGC CGACGACGTG
GTCGCGGCGC TGCTCGCCAG CGGCACGGCG AAGTCCGAGG TCCCGCCGAA TCCGATGTCG
GCCGATCGCG TGCGCTGGGA ACACATTCAG CGCATCTATG AGATGTGCAA TCGCAATGTG
TCGGAAACAG CCCGGCGGCT CAACATGCAC CGCCGCACGC TGCAACGCAT TCTGGCGAAA
CGCGCGCCTC GCTGA
 
Protein sequence
MNATPDVSPQ ADRSLLIVED DKPFLERLSR AMETRGFNVT PCDSVSDGLA HIGKSAPAFA 
VVDLRLGDGN GLDVVSALKR ERPDARAIVL TGYGNIATAV TAVKLGAIDY LSKPADADDV
VAALLASGTA KSEVPPNPMS ADRVRWEHIQ RIYEMCNRNV SETARRLNMH RRTLQRILAK
RAPR