| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0106 |
|---|
| Symbol | |
|---|
| ID | 3674306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 125554 |
|---|
| End bp | 126033 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637711642 |
|---|
| Product | preprotein translocase subunit SecB |
|---|
| Protein accession | YP_316726 |
|---|
| Protein GI | 75674305 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1952] Preprotein translocase subunit SecB |
|---|
| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0552853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACG GCAACGGCAC GCCACCCGAG ACAGCCCCTT CACCCCAGTT GAACGTGCTG
GCCCAGTACA CCAAGGATTT CTCTTTCGAG AATCCCAACT CGCCCGCCTC TCTCGCGCCT
CAGCAACAGC CTCCCTCGAT CAACGTTCAG ATCAATGTCG GCGCCAGCAA TGTGGCGGAG
AACGACTACG AGGTGGTGCT CAAAGTCGAA GGCAAGGCGG AACATGCCGG CAAACTGATG
TTCAGTTTCG AACTCGCTTA TGCGGGCGTA TTCCGGATCG TCAACGTTCC CCAGGAAAAT
CTTCATCCGC TGGTGATGAT CGAATGTCCT CGGCTGTTGT TCCCCTTCGC CCGCGAAATC
GTCGCCACGG CCGTTCGTGA CGGCGGATTC CCGCCATTGA TGCTCGACCC CATCGATTTC
GTAAGCCTGT ATCGACAGAA CATGGAACGT CAGGCCGCGG CGCAACAACA GCCAAGTTGA
|
|---|
| Protein sequence | MTNGNGTPPE TAPSPQLNVL AQYTKDFSFE NPNSPASLAP QQQPPSINVQ INVGASNVAE
NDYEVVLKVE GKAEHAGKLM FSFELAYAGV FRIVNVPQEN LHPLVMIECP RLLFPFAREI
VATAVRDGGF PPLMLDPIDF VSLYRQNMER QAAAQQQPS
|
|---|
| |