Gene Nwi_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0105 
Symbol 
ID3674305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp124822 
End bp125541 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID637711641 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_316725 
Protein GI75674304 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0597936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAA TCGTTCTCGA TACCGAAACC ACCGGCCTGG ATCCGCTGCG AGGCGACCGC 
CTTGTTGAGA TCGGCTGCGT TGAGATGTTC AACCGCATGC CGACGGGACA GACGTTCCAC
CGCTACATCA ATCCCGAACG TGACATGCCG CAGGAGGCAT TCGCGGTCCA TGGCCTGTCG
AGCGATTTTC TCGCCGACAA ACCGCTGTTT GCGCACGTCG TCGATGAGTT TCTGGAGTTT
ATCGGTGATG CGCCCTTGGT CATTCACAAC GCATCGTTCG ATATCAGCTT CATCAATGCC
GAGCTTGATC GTCTTAAAAG GCAAGCGATC GGCCGCGATC GGCTGGTGGA TACGCTGTTG
CTGGCGCGTC GGAAGCATCC CGGCGTCTCG AACCGGCTGG ACGATCTGTG CTCGCGCTAT
GCCATCGACA ACAGCCGTCG GACCAAGCAC GGCGCATTGC TGGACGCCGA ACTGCTGGCG
GAAGTCTATA TCGATCTGAT CGGCGCGCGC CAGTCGCAAT TGATCCTGGT GGAAACTGCG
CCCCGCCAGC GCGGCGGGTC ATTGGAAATG CCAAGACGCC AGCGAACCGT GCCGCTGGCG
TCACGCGTCA CCGCGGCCGA CCGCATCGCG CATCGGGAGT TCATCGCTAC ACTCGGCGAG
AAGGCGATTT GGATGGAATT CCTGGAACAG GACTCCGAAA AGACCAGAAC CGGCCTGTAG
 
Protein sequence
MREIVLDTET TGLDPLRGDR LVEIGCVEMF NRMPTGQTFH RYINPERDMP QEAFAVHGLS 
SDFLADKPLF AHVVDEFLEF IGDAPLVIHN ASFDISFINA ELDRLKRQAI GRDRLVDTLL
LARRKHPGVS NRLDDLCSRY AIDNSRRTKH GALLDAELLA EVYIDLIGAR QSQLILVETA
PRQRGGSLEM PRRQRTVPLA SRVTAADRIA HREFIATLGE KAIWMEFLEQ DSEKTRTGL