Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0100 |
Symbol | rho |
ID | 3674300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 120114 |
End bp | 121379 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637711636 |
Product | transcription termination factor Rho |
Protein accession | YP_316720 |
Protein GI | 75674299 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.581004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.035165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGAAA TGAAACTTCA AGACCTCAAG GCCAAGACTC CAGCCGAACT CGTCTCGTTT GCGGAGGAGC TTGGGGTCGA GAACGCCAGC ACCATGCGCA AGCAGGAGCT GATGTTCGCC ATTCTGAAGC AGCTTGCCAT TCAGGAAACC GACATCATCG GCGAGGGTGT CGTCGAGGTC CTCTCGGATG GCTTCGGCTT TCTGCGCTCG CCCGATGCCA ACTATCTGCC GGGTCCGGAC GATATTTACG TTTCACCTTC GCAGATTCGC CGCTTCGGCC TGAGAACCGG CGACACCATT GAGGGGCACA TCCGCAGCCC CAAGGAAGGC GAGCGCTATT TTGCACTGCT GAAAGTCAAT ACGCTCAATT TCGAAGACCC CGAGAAGTCG AAGCACAAGG TCAACTTCGA CAACCTGACG CCCCTGTTTC CCGATCAGCG GTTTCGCCTC GAACTTGAAG ATCCTACCCG CAAGGATTTG TCGGCGCGGG TCATCGATAT CGTCGCTCCG ATCGGCAAGG GCCAGCGCGC CTTGATCGTG GCGCCGCCGC GCACCGGCAA GACCGTGCTG ATGCAGAACA TCGCGCACTC CATCACCGCT AATCATCCGG AGTGCTATCT GATCGTTCTT CTGATCGACG AGCGCCCGGA GGAAGTCACC GACATGCAGC GCTCGGTGAA GGGTGAAGTC GTATCCTCGA CTTTCGACGA GCCCGCGGTG CGTCACGTTC AGGTCGCCGA GATGGTGATC GAGAAAGCCA AACGCCTGGT CGAACACGGA CGCGATGTTG TCATCCTGCT TGATTCGATC ACGCGCCTTG GCCGCGCCTA CAACACCGTG GTGCCCTCCT CCGGCAAGGT GCTGACCGGC GGCGTCGACG CCAACGCCCT GCAGCGGCCG AAGCGATTCT TCGGCGCCGC CCGTAATATC GAGGAAGGCG GGTCACTGAC CATCATCGCC ACCGCGCTGG TCGATACCGG AAGCCGGATG GACGAGGTGA TCTTCGAAGA GTTCAAGGGC ACCGGCAATT CTGAGTTGAT CCTCGACCGC AAGGTCGCCG ACAAGCGCAC CTTCCCGGCG ATCGACATCG CCCGCTCCGG AACGCGCAAG GAAGAACTCA TCACCGATCC GCAACTGCTC AAGAAGATGT ATGTGCTGCG GCGCATCCTC AATCCCATGG GCACCATGGA TGCGATCGAG TTCCTGCTGG ACAAGCTGCG CAACACCAAG AACAATTCCG AGTTCTTCGA GTCGATGAAT ACCTGA
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Protein sequence | MREMKLQDLK AKTPAELVSF AEELGVENAS TMRKQELMFA ILKQLAIQET DIIGEGVVEV LSDGFGFLRS PDANYLPGPD DIYVSPSQIR RFGLRTGDTI EGHIRSPKEG ERYFALLKVN TLNFEDPEKS KHKVNFDNLT PLFPDQRFRL ELEDPTRKDL SARVIDIVAP IGKGQRALIV APPRTGKTVL MQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV VSSTFDEPAV RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP KRFFGAARNI EEGGSLTIIA TALVDTGSRM DEVIFEEFKG TGNSELILDR KVADKRTFPA IDIARSGTRK EELITDPQLL KKMYVLRRIL NPMGTMDAIE FLLDKLRNTK NNSEFFESMN T
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