Gene Nwi_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0085 
Symbol 
ID3675050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp102283 
End bp103170 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID637711621 
Productexodeoxyribonuclease III xth 
Protein accessionYP_316705 
Protein GI75674284 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.780104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0810533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGGAGA GGGTGCCCGA GCATCCGCGA GGGCGGGTGA AGGTAAGAAC CATCGACCGT 
ACCAAGCACC CCATGCACCT CACCTTGACC ACCTGGAATA TCAACTCGGT GCGGCTGCGC
ATCGATCTGG TCGCCAGGTT TCTGAAAGCG CAGCGGCCGG ACGTTCTGTG CCTGCAGGAG
ACCAAATGCC CCGATGACGC GTTTCCGCTG AAACGCTTTC ACCGGCTCGG CTATGAGCAC
ATCGCGCTCA ACGGCCAGAA GGGATATCAC GGGGTGGCGG TGGTCTCGAA GCTGCCTTTC
GACGCCAGCA ACATCCGCAC ATTCTGCGAC AAGATCGACT CCCGCCACGT CAGCGTGATC
CTCGGCGGCG AGGCGGGTCT CGCCGCGCCG CTGGTGCTGC ATAACTTCTA CGTGCCCGCG
GGCGGCGACA TTCCCGATCC CGCGCTCAAT CCGAAGTTCG CCCACAAGCT GCAGTTTCTC
GACGAGATGA AAGGCTGCGC GCCGCTGCAT CCGGACAACG GCGACCGGCA TGTGCTGGTC
GGCGATCTCA ACGTCGCTCC GCATGAGAAC GACGTCTGGT CGCACAAACA GCTCCTCAAG
ATCGTCTCGC ACACACCCAT CGAATGCGAA AAGCTGCTCG GCGTGCAGGA TCGCGGCAAC
TGGGTCGACA TCGCGCGCGC GCGGATCCCG ATGTCGGAGA AAGTCTATAC GTGGTGGAGC
TATCGCGCCG CCGACTGGGT CGCCGCCAAT CGCGGCCGCA GGCTCGATCA TATCTGGGTC
TCGGAGGCGC TGCGCGACGG AATCCGCGAC TTCCGCATCA CTCGCGACGC CCGCGGCTGG
GAGCGTCCAT CCGATCATGT CCCGGTGACA GCGGTGATCG AGGTGTGA
 
Protein sequence
MWERVPEHPR GRVKVRTIDR TKHPMHLTLT TWNINSVRLR IDLVARFLKA QRPDVLCLQE 
TKCPDDAFPL KRFHRLGYEH IALNGQKGYH GVAVVSKLPF DASNIRTFCD KIDSRHVSVI
LGGEAGLAAP LVLHNFYVPA GGDIPDPALN PKFAHKLQFL DEMKGCAPLH PDNGDRHVLV
GDLNVAPHEN DVWSHKQLLK IVSHTPIECE KLLGVQDRGN WVDIARARIP MSEKVYTWWS
YRAADWVAAN RGRRLDHIWV SEALRDGIRD FRITRDARGW ERPSDHVPVT AVIEV