Gene Nwi_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0078 
Symbol 
ID3675637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp91510 
End bp92412 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID637711614 
Productacyl-CoA thioesterase 
Protein accessionYP_316698 
Protein GI75674277 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0521251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA GCCTGACCGA TCTGATCTCG ATCCTCGATC TGGAGCCGAT CGAGGAAAAC 
CTGTTTCGCG GCGGCAGCCC GAAGACCGGC TGGCAGCGGG TGTTCGGCGG GCAGGTGATC
GGGCAGGCGA TGGCGGCGGC CTGCCGCACC GTGGAAGGCC GCCTGCCGCA CTCGCTGCAT
TGCTATTTCA TCCTGCCGGG CGACCCCGCC GTTCCGATCA TCTATCAGGT GGAGCGGCTG
CGCGACGGCA GGAGCTATTC GACGCGGCGC GTCACCGCGA TCCAGCACGG CCGCGCCATC
TTCTCGATCA TGGTCTCGTT CCATGTGGAC GAGGAGGGCG CCTTCAATCA TCAGGAGAAG
ATGCCGGACG TGCCGCCGCC CGAGCAGCTT TCGCCGGAGG AATTCGCCAA GCAGCCGACG
TTCAAGGAGA TGCCGGAGTT CATCCGCCGT TACTATGAAT CGGACCGGCC GATCGAACTG
CGCCCGGTCG AGCTCAACCG CTACTTCGGC GAGCGGATCG AGGACGGCCG CGTCCATGTC
TGGATCCGCA CCGCGTCGAA CCTGCCCGAC GACCCGGCGC TGCACATGTG CGCGCTGGCC
TATGCGTCGG ATTTCGCGCT GCTGGATGCG GTGATGGCGC GCTACGGCCG CACCCTGTTC
GACAAGCACA TGTTGGCGGC CTCGCTCGAT CACGCCATGT GGTTTCACCG CCCGTTTCGC
GCCGACGAAT GGCTGCTCTA TGCGCAGGAT TCGCCGAGCG CGCAGAGCGG ACGTGGCCTC
GCGCGCGGCC TGATCTTTAG GCAGGACGGC ACGCTGATCG CTTCGGTGGC GCAGGAAGGC
TCGGTGCGTG AGCGGAGCTC GAGCATTTTC GCTTCTGATG GAATCAGAAG CGAGGCTTCA
TAA
 
Protein sequence
MSESLTDLIS ILDLEPIEEN LFRGGSPKTG WQRVFGGQVI GQAMAAACRT VEGRLPHSLH 
CYFILPGDPA VPIIYQVERL RDGRSYSTRR VTAIQHGRAI FSIMVSFHVD EEGAFNHQEK
MPDVPPPEQL SPEEFAKQPT FKEMPEFIRR YYESDRPIEL RPVELNRYFG ERIEDGRVHV
WIRTASNLPD DPALHMCALA YASDFALLDA VMARYGRTLF DKHMLAASLD HAMWFHRPFR
ADEWLLYAQD SPSAQSGRGL ARGLIFRQDG TLIASVAQEG SVRERSSSIF ASDGIRSEAS