Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0072 |
Symbol | |
ID | 3675630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 85217 |
End bp | 86920 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637711607 |
Product | PAS sensor protein |
Protein accession | YP_316692 |
Protein GI | 75674271 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.587955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.109403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTCT TCAAAAAGTG GTCGATCGCA AAAGAAGATG CTGCGAAAAC CGCAGCAATC AGAAAATCGC AGGCCGTCAT CGAGCTCGGT CTTGATGGAA CGGTCGTCAC GGCTAACGAG AACTACCTCA GCATATTCGG CTACACGCTG GCGGATGTTC GCGGCCAGCA CCATAGCATG TTTGTGGAGG CGGACGAGCG GTCCGGCGCC GCATATCGCG ACTTCTGGGC CAGGCTGAAC AAGGGTGAGA CCCAATCGGC CGAATTCAAA CGTATCGACA GGCACGGCGA CGAGGTCTGG GTTCAGGCTT CCTACATTCC GGTGCTGGAT TCGAGAGGGA ATCCGAAAAA AATCATCGCG CTGGCGGCTG ACATCACCGC CAAGAAGATC AAGGAGCTGG AGAACGCGGG TCAGGTCTCC GCCATCGAGC GCGCGCAGGC CGTGGTCGAA TTCAACCTCG ACGGCACGAT CATTACCGCG AACAAGAACT TCCTCAATGT GATGGGCTAC ACCCTCGGTG AAATGCAGGG GAAGCATGAC CGGGTATTCG TGGAGTCATC GGAGCGGGCT GGCGACGCCT ATCGCGACTT CTGGGCCAGG CTCAATCTCG GTGAGCCTCA ATCCGCTGAA TACAAGCGGA TTAATAAGGC CGGGAACGAA GTGTGGCTGC TGGCGACCTT CAACCCGATC GTGGACGAGA GCGGCAAGCC CTTCAAGGTT GTTGCGTTCG CGACCGACGT CACCAAGCAG AAGGTGAAGT CGGCTGATCT CGAAGGCCAG ATCACGGCCA TCGGAAAGTC GCAGGCGGTC GTCGAACTCG GCATGGATGG AAAGATCCTG ACCGCGAACG ACAACTTCCT GAAAACGTTC GGTTACGCGC TCCTCAAGGA CATCCAGGGC AAGCACCACA ACATGTTTGT GGAGGCTGCC GAGCGGACCA GCACCGCCTA TCGCGACTTC TGGGCCAGGC TCGCTCGCGG CGAGGCTCAG TCGGCCGAGT ACAAGCGTAT CGGCAAGGAC GGCAAGACCG TCTGGCTGCA GGCTTCCTAC AATCCGGTTC TGGATTCGAG GGGCAAGCCT GTAAAGGTGG TTGAGATCGC GACCGACATC ACGGCCAGGA AGCTCAAGGC CCTGGAGAAC GAGGGTCAGC TCGCCGCTAT CGAACGCGCC CAGGCGATCG CTTCGTTCAG GCCGGACGGC ACCATTATCG CCGCCAACGA CAAGTACCTG AAGGCGATGG GTTACACCCT CGGCGAGGTT AGCGGCAAGC ATGACGGAAT GTTCGTCGAG TCTTCGGAGC GTTCCGGTTC TGCCTATCGC GAGTTCTGGG GCAAGCTCAA TCGCGGCGAG GCTCAGTCGG CCGAGTTCAA GCGCGTCGCC AAGGACGGCA GCGAGGTTCG GATCCGGGCT TCGTACATCC CGGTCCTCGA CGCCCAGGGC AAGACGACCA AGGTTGTCCA GTACGCCATG GTGATCGAAT CGGCAGCCGC CGCCAGCGAA GAAATGAGTG CTCCCATCCA GGAAGCACCC GTGTCGATGG CCAAGCAGGC CGACGAGCAG AGCTTGAGCA TGAGCCGGCT GGAAAGCCGT CGCAAGAGCG TCAACGCTGG TCCGTCGCCC CTCGCTCAGT TCCTGACGAA CCTTCGTGAG GGATTCAGCT CCGCGGTGGC GTCCTCGACG AGAGCTGTCG CCAACTTCTT GTGA
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Protein sequence | MFFFKKWSIA KEDAAKTAAI RKSQAVIELG LDGTVVTANE NYLSIFGYTL ADVRGQHHSM FVEADERSGA AYRDFWARLN KGETQSAEFK RIDRHGDEVW VQASYIPVLD SRGNPKKIIA LAADITAKKI KELENAGQVS AIERAQAVVE FNLDGTIITA NKNFLNVMGY TLGEMQGKHD RVFVESSERA GDAYRDFWAR LNLGEPQSAE YKRINKAGNE VWLLATFNPI VDESGKPFKV VAFATDVTKQ KVKSADLEGQ ITAIGKSQAV VELGMDGKIL TANDNFLKTF GYALLKDIQG KHHNMFVEAA ERTSTAYRDF WARLARGEAQ SAEYKRIGKD GKTVWLQASY NPVLDSRGKP VKVVEIATDI TARKLKALEN EGQLAAIERA QAIASFRPDG TIIAANDKYL KAMGYTLGEV SGKHDGMFVE SSERSGSAYR EFWGKLNRGE AQSAEFKRVA KDGSEVRIRA SYIPVLDAQG KTTKVVQYAM VIESAAAASE EMSAPIQEAP VSMAKQADEQ SLSMSRLESR RKSVNAGPSP LAQFLTNLRE GFSSAVASST RAVANFL
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