Gene Nwi_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0045 
Symbol 
ID3676484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp50291 
End bp52807 
Gene Length2517 bp 
Protein Length838 aa 
Translation table11 
GC content67% 
IMG OID637711580 
Producthistidine kinase 
Protein accessionYP_316665 
Protein GI75674244 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.327934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGCG TAATCGGGGT GATGCGTCGG ACCTTGCTGT CATGCACCTC GCTGGTGCCG 
GGCGGCATCG CGGGCGCCGG CGCGGTCAGC CTCATCGACA CCTCACCTGC CTGGGCCGCA
GAACCGGCGC TGAACGAGCG GCTGATCCAG GCCTTCATGA ATCTCAGCCG ACAGGATCTG
ACGGCGCTGG CGATGGCGCT TGGCGTGCTG AGCTTCTCGG TGGTCGCCGC TATCCTGCTG
ATGCGCACGC GCATCCGCGC CGCCGCAAAT GAGCAGCGTT TGCGCAGCGA GCTCCGCGAA
CTTCAATCGG AGGCCGACCG TTTTCGCGCG CTGCTGTTCG TGGAACCGCA GATTCTGATT
TCGTGGGGCG CGGGCGAGGA ACGGCCCCAG ATCAGCGGCG ATATCGCGCT GCTGTTGCCG
CAGGATGCAA AACAGCCCTT GCGGATTCTG GCGTTCGGAA CCTGGCTGCC GCCCGAGCCG
GCGTTGCAGA TGGATCACGC GGTCGATGCG CTGCGCAGCG CCGGAGAAGG TTTCCTGCTC
AATCTGGTCA CCTCGGCCGG CCGCACCGTG GAAGCGATGG GCCGCGCCAT CGGCGGCCAG
GCCATCGTGC GCATCCGTGA TCTCGGCGGC CTGCGGCGCG ACCTCGCCGA GATGACGCTG
CGGCACGACA GTCTGCTGGC GGAGACGGAA ATGCTGCGGG CCTTCGCGAC CGCGGCGCCC
TGGCCGCTCT GGGCGAGAGG CAAGGACGGC AAGCTTTCCT TCGCCAACCA GGCCTATGCG
CGCGCTACCG AGGCCGCCGA CTCGGCCGAC GCCATCCAGC GCAACCTCGA ACTGCTCGAC
AGCGAGGACC GGACCGCGAT GTCGCGGGCG CTGAACGACC ATGCCACCTT TGCCGCGCGA
TTGCCGATCA TCATCGGCGG CGAGCGGCGC ATGTACGACG TTCACGCACT CCGGACCGGC
GGCGGAAGCG CCGGCATCGC GCTCGACGCC AGCGAGGCGA CGGCGCTGAG CGGGGCGCTG
GCGCGGATGG CGGACGCGCA TCGCCGGACC CTCGACCAAC TGTCATCCGG CGTCGCCGTG
TTCGACGGCC AGCGGCGGCT CGCTTTCTAC AACGACTCCT ACCGCCGGCT GTGGGACCTC
GACCGGCCCT TCCTCGACGG ACATCCCGAC GATTCCAGCG TGCTCGATCG CCTGCGCGCG
GGGCGCAAGT TGCCGGAGCA GCCCGACTTC CGCGCCTGGA AAGCCCGCCT GCACGAAGCC
TATCGCGCCA ACGAGGCCGT CAAGGACGTA TGGTATCTGC CGGACGGACG CGCGCTCAGC
ATCGTCACCA CGCCGAATCC GGAAGGCGGC GTCACCTATC TGTTCGACGA TGTCACCGAA
AGCCTGGATC TGGCCCGCCG ATATGACCGG CTTATCAACG TGCAGCGCGA GACCCTCGAC
AGCCTGACCG AAGCGGTCGC GGTGTTCGGC AGCAACGGCC GCGCGCAGCT TTTCAATCCG
GCCTTCGCGC GGATGTGGAA GCTTTCGCCC GAGGCGCTGG CGCAGCAGCC GCATATCGAT
ACGGTCGAGG CGTGGTGCAA GCCGCTGTTC GACGACGACG ACGCCTGGCG GACGATCCAC
AAGGCCGTCA CCGGCATCGA CAATCGCACC GCGGTGCCGC TCAAGCTCGA GCGCAAGGAC
GGCAGCATCC TGGACTGCAT GACCATGCCG CTGCCCGACG GCGCCACCAT GCTGACCTTC
CACGACATCA CCGATAGCGA GAACGTGGAG CGCGCGCTGC GCGAACGCAA CGATGCGCTC
GAGGCCGCCG ACCAGATGAA GGTCGATTTC GTCCACCACG TCTCATACGA ACTGCGCTCG
CCCCTGACGA CCATCATCGG CTTCGCGCAC CTCATGAACG ATCCCGGCAC CGGACCGCTC
ACCGAGAAGC AGGCCGAATA TGTCAACTAC ATCACCTCGT CGACCGACGC GCTGCTGGCG
CTGACCAACA ACATCCTCGA CCTCGCCACC ATCGATGCGG GCGCCATGAC GCTCGAACTC
GGGCCGGTCG ACGTCCGCAA GACCATCGCG GCGGCGGCGG AAGGCATTCA GGACCGGCTG
ACCCGCGACC GCATCGTGCT GAATGTCGAC GTCGATCCGG ACATCGGCGA CTTCATCGGC
GACGAGCGCC GCATCATTCA GGTCCTCTAT AATCTACTTG CCAACGCCGC GGGCTTCTCG
CCACCGGACG CCGTGATCAC GGTCAGCGCC CGGCGCACCG AACACAGCGT GAGGTTCGCC
GTGATGGACG AAGGCCCCGG CATTCCGCCG GACGTCAGGG ACAAGGCGTT CGACTGGTTC
GAAAGTTACG CGAACGGATC GCGGCATCGC GGCGCGGGCC TTGGCCTCTC GCTGGTGCGC
TCCTTCGTTG AACTCCACGG CGGACGCGTG CATTTCGATC CCGCCATCAA GAGCGGGACC
AGGGTCGTTT GCGACTTTCC GCTCGACCGG GGCGCCCACC GGAACGCCGC CGAATGA
 
Protein sequence
MSGVIGVMRR TLLSCTSLVP GGIAGAGAVS LIDTSPAWAA EPALNERLIQ AFMNLSRQDL 
TALAMALGVL SFSVVAAILL MRTRIRAAAN EQRLRSELRE LQSEADRFRA LLFVEPQILI
SWGAGEERPQ ISGDIALLLP QDAKQPLRIL AFGTWLPPEP ALQMDHAVDA LRSAGEGFLL
NLVTSAGRTV EAMGRAIGGQ AIVRIRDLGG LRRDLAEMTL RHDSLLAETE MLRAFATAAP
WPLWARGKDG KLSFANQAYA RATEAADSAD AIQRNLELLD SEDRTAMSRA LNDHATFAAR
LPIIIGGERR MYDVHALRTG GGSAGIALDA SEATALSGAL ARMADAHRRT LDQLSSGVAV
FDGQRRLAFY NDSYRRLWDL DRPFLDGHPD DSSVLDRLRA GRKLPEQPDF RAWKARLHEA
YRANEAVKDV WYLPDGRALS IVTTPNPEGG VTYLFDDVTE SLDLARRYDR LINVQRETLD
SLTEAVAVFG SNGRAQLFNP AFARMWKLSP EALAQQPHID TVEAWCKPLF DDDDAWRTIH
KAVTGIDNRT AVPLKLERKD GSILDCMTMP LPDGATMLTF HDITDSENVE RALRERNDAL
EAADQMKVDF VHHVSYELRS PLTTIIGFAH LMNDPGTGPL TEKQAEYVNY ITSSTDALLA
LTNNILDLAT IDAGAMTLEL GPVDVRKTIA AAAEGIQDRL TRDRIVLNVD VDPDIGDFIG
DERRIIQVLY NLLANAAGFS PPDAVITVSA RRTEHSVRFA VMDEGPGIPP DVRDKAFDWF
ESYANGSRHR GAGLGLSLVR SFVELHGGRV HFDPAIKSGT RVVCDFPLDR GAHRNAAE