Gene Nwi_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0043 
Symbol 
ID3676482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp48119 
End bp49558 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content66% 
IMG OID637711578 
Productbifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_316663 
Protein GI75674242 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase
[COG4691] Plasmid stability protein 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.658054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCC TGACCGTCCG CAAACTCGAC GACGCCGTTA AGGCCCGGCT GCGAGCGCGC 
GCCGCAGTTT CCGGCCGCTC GGTGGAGGAG GAGATCCGCG TCATCCTCCG TGAGGCGACC
GTTATTCCCC CCCCCACGGC GTTCGACGAT CCGGCCTCCC GCAACGCAGC ATCTCTGCGT
GACAAAGGCT TCTTCAACGT TTCCAGTCGA TTGACGAAAG TGACAGTGAT CGTCGGCGGC
GGGATCGCCG CCTACAAGGC GCTCGACCTG ATCCGGAGGC TCAGGGAACG CGGATTTTTT
GTGCGATGCG TCATGACAAA TGCTGCGCAG CAATTCGTCA CGCCGCTCAG CGCTGGATCC
CTCTCTAACG AGCGTTGCTA TACGGATCTG TTCGATGCCA GCAGCGAATT CGACGCGGGC
CATATCCGGC TCGCCCGCGA CTGTGACCTC ATCGTGGTGG CGCCCGCCAC CGCTGACCTG
ATGGCAAAGA TGGCAAACGG CCTCGCCAAC GATCTGGCGA GCGCCATTCT GCTCGCCTCC
GACAGGCCGG TTTTGCTGGC GCCGGCGATG AATCCGCTGA TGTGGAATAA CCCGGCGACA
CGCCGCAACG TGGCGCGGCT CGCGCGCGAC GGCGTCGCCA TGATCGGCCC CGACGCCGGC
GAGATGGCGG AAGCAGGTGA AGCCGGCGTC GGCCGCATGG CCGAGCCCGT GGCGATCGCC
GCCGCCGCCG CGCGGATGCT CGGGCCACCG CAAACGCAAG CGCAACCTCT AAAAGGCCGT
CGCGTCCTGA TTACCGCCGG CCCGACCCGG GAGGCGATCG ATCCGGTGCG CTACATCGCC
AACCGCTCCT CGGGCAAGCA GGGCTTTGCC ATCGCCGCGG CGGCGCAGGC GGCGGGAGCC
GAAGTGACGC TGATTTCTGG CCCCGTGGAT CTCGACGACC CCCCCGGCGT CACTGTGGCG
CATGTCGAAT CCGCGCGCCA GATGCTGGCG GCCGTCGAGG CGGCGCTGCC TTCCGACATT
GCGATTTTCA CCGCCGCGGT CGCCGACTGG CGTGTCGCGC ATGCAGGTGC GCAGAAACTG
AAGAAAACCG AAGCCGGAGT GCCGCCGCTG CAACTGATCG AGAACCCGGA CATTCTCGCG
ACCATTTCGA ACCTGCGCGA CGAACGCCCG CCGCTCGTGA TCGGCTTCGC CGCCGAGACC
GAGCATCTCA TCGGCAACGC CAAGGCGAAA TTCGCGCGCA AGGGCTGCGA CTGGATGATC
GCCAATGACG TATCGCCGGG AACCGGCGTG ATGGGCGGCG ACCGCAACAC CGTGCATCTG
CTGACGCGCG GCGAAGACGG AGAGATCAGG ACCGAGTCCT TCCCCGTCAT GACCAAGGAA
GAGGTGGCCG CCATGCTGAT CGAACGCATC ATCTCAGCCC TGCCGGGTCC GGCGGCATGA
 
Protein sequence
MASLTVRKLD DAVKARLRAR AAVSGRSVEE EIRVILREAT VIPPPTAFDD PASRNAASLR 
DKGFFNVSSR LTKVTVIVGG GIAAYKALDL IRRLRERGFF VRCVMTNAAQ QFVTPLSAGS
LSNERCYTDL FDASSEFDAG HIRLARDCDL IVVAPATADL MAKMANGLAN DLASAILLAS
DRPVLLAPAM NPLMWNNPAT RRNVARLARD GVAMIGPDAG EMAEAGEAGV GRMAEPVAIA
AAAARMLGPP QTQAQPLKGR RVLITAGPTR EAIDPVRYIA NRSSGKQGFA IAAAAQAAGA
EVTLISGPVD LDDPPGVTVA HVESARQMLA AVEAALPSDI AIFTAAVADW RVAHAGAQKL
KKTEAGVPPL QLIENPDILA TISNLRDERP PLVIGFAAET EHLIGNAKAK FARKGCDWMI
ANDVSPGTGV MGGDRNTVHL LTRGEDGEIR TESFPVMTKE EVAAMLIERI ISALPGPAA