Gene Nwi_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0030 
Symbol 
ID3675153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp33243 
End bp35432 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content65% 
IMG OID637711565 
Producthaem catalase/peroxidase 
Protein accessionYP_316650 
Protein GI75674229 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0376] Catalase (peroxidase I) 
TIGRFAM ID[TIGR00198] catalase/peroxidase HPI 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.187858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA AGACAAATGA CGGAAAAGCG GGTCAATGCC CGTTCACGAG CGGTCGCGGA 
CACAAGAATC GCGACTGGTG GCCGGAGCAG CTCGATGTTC AGGTCCTTCA TCAGAAATCA
AACCTGTCCA ACCCGATGGG CCGGGACTTC GACTACGCCA GCGCGTTCGC AAGCCTCGAC
CTGAACGCCG TCATCGCCGA TCTGAAGGCG CTGATGACGG ATTCGCAGGA CTGGTGGCCG
GCCGATTTCG GCCACTACGG CGGACTGATG GTCCGCATGG CATGGCATAG CGCGGGCACC
TATCGCATCA CCGACGGCCG CGGCGGCGCC GGTGGCGGCC AGCAGCGTTT CGCGCCGCTG
AACTCCTGGC CGGACAACGT GCTGCTCGAC CGGGCGCGCC GCCTGTTGTG GCCGATCAAG
CAGAAGTACG GCCGCAAGAT TTCCTGGGCC GACCTTTATG TCCTCGCGGG CAATGCCGCG
CTGGAATCGA TGGGTTTCAA GCCCTTGGGC TTCGCCGGCG GCCGTGTCGA CGAATGGGAG
CCGCAGGAAT TGTTCTGGGG TCCGGAAGGC GCCTGGCTCG GCGACGAGCG CTACAGCGGC
GAACGTGAGC TGGCGGAGCC GCTCGCCGCG GTGCAGATGG GCCTGATCTA CGTCAATCCG
GAAGGGCCGA ACGGCCAACC GGACCCGCTC GCTGCCGCCA AGGATATCCG CGAGACATTT
CTCCGCATGG CGATGAATGA CGAAGAAACC GTCGCGCTGA TCGCGGGCGG CCACACCTTC
GGCAAGACCC ACGGCGCCGG CGACGCGTCG CTGGTCGGAC CGGTGCCGGA CTCCGCCCCG
ATCGAGGATC AGGGACTCGG CTGGAAGGGC CGGTTCGGCA CGGGCAAGGG GGCTGACGCA
ATCGGCAGCG GCCTGGAAGT GACCTGGACC CAGACGCCGA CCAAGTGGGA CAACAACTTC
TTCGACACGC TGTTCGGGTT CGAATGGGAG CTGACCAAGA GCCCTGCCGG CGCGCACCAG
TGGAGGGCGA AGGACGCTCC GGCCATCACC CCGGACCCCT TCGACGAGTC GAAGAAGCAC
GTGCCGACCA TGCTGACGAC GGATCTGTCG CTGCGCTTCG ATCCTATCTA CGGCGAAATC
TCGAAGCGCT TCCATGAGAA TCCCGACCAG TTTGCGGACG CCTTCGCCCG CGCCTGGTTC
AAGCTGACCC ATCGCGACAT GGGACCCCGC GACCGCTATC TCGGCCCGCT GGTGCCAAAG
GAAGTGATGA TCTGGCAGGA TCCGATCCCG GCCGTGGACC ATGAGTTGGT CGACGACAAC
GACATCGCCG ACCTGAAGGC GAAAATCCTC GCCTCCGGCT GCACCGTGGC GCAGCTGGTC
TCGACCGCCT GGGCCTCGGC CTCCACCTTC CGCGGCTCCG ACAAGCGCGG CGGCGCCAAT
GGGGCGCGCA TCCGGCTTGC CCCGCAGAAG GATTGGGAGG TCAACCAGCC GATCCAGCTG
AAAGCGGTGC TGGCGAAGCT CGAAGAGATC CAGGCCGAAT TCAATGACGC GCAGACAGGC
GGCAAAAAGG TCTCGCTCGC CGACCTGATC GTGCTCGGCG GATCGGCCGC GGTCGAGAAG
GCGGCCAGAG ACGCCGGGAT CGACTTGAAG GTGCCATTCA CGCCCGGCCG CATGGATGCG
TCGCTGGACC AGACCGACGT GGAATCCTTC GCGCCGCTTG AGCCGCGCGC GGATGGCTTC
CGCAACTACA TCAGCGACAG GCACCAGTTC ATGGCGCCCG AGGAGGCGCT GGTGGATCGC
GCGCAACTGC TGAACCTGAC CGGACCGGAG ATGACGGTTC TCGTCGGCGG CCTGCGCGTG
CTGGGCGCCA ATGCCGCAGA CTCTAGGCAT GGCGTCTTCA CCACCCGCCC GGGCAAGCTG
ACGAACGACT TCTTTGTCAA CCTGCTCACC ATGGATACCG AGTGGCAACC GGTCGCCGGT
CAGGACGGCG TTTACGAAAG CCGCGACCGC AAGACCGGCA CGCTGAAGTG GACGGGCACG
CGCGTCGACC TGATCTTCGG CTCGCACTCC CAGCTCCGCG CATTCGCGGA AGTCTATGCG
TGCGCAGACT CCGGCGAGAA GTTCGCGAAC GACTTCGCCG CCGCATGGGC CAAGGTCATG
AACGCCGATC GCTTCGATCT CAAGGCCTGA
 
Protein sequence
MDAKTNDGKA GQCPFTSGRG HKNRDWWPEQ LDVQVLHQKS NLSNPMGRDF DYASAFASLD 
LNAVIADLKA LMTDSQDWWP ADFGHYGGLM VRMAWHSAGT YRITDGRGGA GGGQQRFAPL
NSWPDNVLLD RARRLLWPIK QKYGRKISWA DLYVLAGNAA LESMGFKPLG FAGGRVDEWE
PQELFWGPEG AWLGDERYSG ERELAEPLAA VQMGLIYVNP EGPNGQPDPL AAAKDIRETF
LRMAMNDEET VALIAGGHTF GKTHGAGDAS LVGPVPDSAP IEDQGLGWKG RFGTGKGADA
IGSGLEVTWT QTPTKWDNNF FDTLFGFEWE LTKSPAGAHQ WRAKDAPAIT PDPFDESKKH
VPTMLTTDLS LRFDPIYGEI SKRFHENPDQ FADAFARAWF KLTHRDMGPR DRYLGPLVPK
EVMIWQDPIP AVDHELVDDN DIADLKAKIL ASGCTVAQLV STAWASASTF RGSDKRGGAN
GARIRLAPQK DWEVNQPIQL KAVLAKLEEI QAEFNDAQTG GKKVSLADLI VLGGSAAVEK
AARDAGIDLK VPFTPGRMDA SLDQTDVESF APLEPRADGF RNYISDRHQF MAPEEALVDR
AQLLNLTGPE MTVLVGGLRV LGANAADSRH GVFTTRPGKL TNDFFVNLLT MDTEWQPVAG
QDGVYESRDR KTGTLKWTGT RVDLIFGSHS QLRAFAEVYA CADSGEKFAN DFAAAWAKVM
NADRFDLKA