Gene Nwi_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0011 
Symbol 
ID3676451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp12141 
End bp12839 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID637711546 
Productpeptidase M22, glycoprotease 
Protein accessionYP_316631 
Protein GI75674210 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.202985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCC TTGCGATCGA CACCGCCCTC GATGCCTGTG CCGCCGGCAT ACTGGACACC 
GACGAAGGCC GCCTGATCGC TCAGGAAACG CTCCCGATGA AGCGCGGCCA CGCGGAAACC
CTGATGCCGC TGATCGCCAG GGTCATCGAA TCCGCGGGAA TCGGCTTTAA GGCGCTGGAC
CGCATCGCCG CGACCACCGG CCCCGGCAGC TTCACCGGCC TGCGCGTGGG GCTGTCGGCC
GCGCGCGGCA TCGCGCTGGC CGCCGACAAG CCGGTGGTCG GCGTAACCAC CCTCGCGGCC
TTTGCGGCCC CGGTGATCGG CGAGGATCGG AAGCCGCCGG TGATCTCCGC CATCGATGCC
CGGCATGATC AGGTTTATTT TCAGGCCATG AGCGGTGACG GCGCCGCGCT GATCCAGCCG
CGCGTCGCGC CGGTCGCGGA AGCGCTTGCG GCATCCCGCT TCGGCGCGCC GCATCTGGTC
GGAAATGCCG CGAGGCTTCT CGCCGATCGC TGGCCCGCGC ACGCCCCGCC CCCGGTCGCG
GTCGATCAGC AGGCAGCGCC CGATATCGTC TGGGTGGCGT GGCTTGGCGC GGCGGTCAGC
CCGGATGCGG CGCCTCCGCG CCCGTATTAC CTGCGCGCGC CCGACGCCAG GCCGACCGGC
GACACCCTGC TAAAACCACG GACGCTGGCC GCATCATGA
 
Protein sequence
MLVLAIDTAL DACAAGILDT DEGRLIAQET LPMKRGHAET LMPLIARVIE SAGIGFKALD 
RIAATTGPGS FTGLRVGLSA ARGIALAADK PVVGVTTLAA FAAPVIGEDR KPPVISAIDA
RHDQVYFQAM SGDGAALIQP RVAPVAEALA ASRFGAPHLV GNAARLLADR WPAHAPPPVA
VDQQAAPDIV WVAWLGAAVS PDAAPPRPYY LRAPDARPTG DTLLKPRTLA AS