| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2825 |
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| Symbol | |
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| ID | 3672976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2907551 |
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| End bp | 2909191 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637711533 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_316583 |
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| Protein GI | 74318843 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACC AGCGCCTGAT TCTTTTCATC GTGTTTTCCT TCTCGCTGCT GCTGCTGTGG
GAAGCGTGGC AGGACAAGCA GGCGCCGGCC CCGGCGACCC GCCCCGTCGC TGGTGCACCG
GCCGGCAGCG CGGCGCCGAC GCCCAGCACG GCTTTGAACG CACCGGCCGC GGCGCCCGCA
CAGACCGGTT TCGCCAAGGG CGCGCGCGCC GTCGTCGAAA CCGACGTGCT GCGCGCGACG
ATCGACGCCA ATGGCGGCGA CCTGCGCGAG CTGCAGCTGC TCGGCTACCG CGAGACCGAA
GACAAGAACC GGGTCTTCAC CCTGTTCGAG GACAGCAGGA CGCGGCCCTA CCTGGCGCAG
AGCGGTTTCG TCGGCGGCGG GCTGCCGACG CATCGCAGCA CCTTCGAGCT GACGCCGGGA
ACCTACCGGC TCACGGGCGG CGCGGCCCGG CTCGAAGTGC CGCTCGTATG GAACGACGCG
GCGCGCGGCG TGCGCGTCGA GAAGACCTTC ATCTTCACGC GCGGCAGCCA CGAAGTCGCG
GTGCGGACCC GCGTCGTCAA CCGTGGCAAA GAGCCGCTCG ACCTCACCCC CTACTACCAG
TTCACACGCC ACGGCGAAGC GCCGCGCGGC GAGTCGTTCT TCCTCTACAC CTATACCGGC
CCGGCCTTCT ACACCGACGC GAAGAAATTC CAGAAAGTCC CGTTCACGGA CATTCAGGAC
GGTTCGGCCG AATTCGAAAA AACCGCGACC AACGGCTGGG TCGGCCTCGT GCAACACCAC
TTCGTCGCCG CCTGGCTGCC CGAGGAGAGC GTCAAGCGCG AGTATTACGC GCGCTCGCTC
GGCGAAGGCC TCTACTCGGC CGGCGTGATA CTCGCCGAGG GTCAGCTCGC CCCGGGTCAG
CAGAAGACCT TCACCGTGCC GCTCTACGCC GGCCCCCAGA GCCAGGCCGT GCTCGAGAAA
GCCGCCCCGG GGCTCGATCT CGCGCGCGAC TACGGCTGGC TGACGCCGCT CGCCTACCCG
ATCTTCTGGT CGCTGGAAAA GATCGAGCGC CTGGTCGGCA ACTGGGGCTG GGCGATCATC
ATTCTGACGA TTCTGATCAA GCTCGCCTTG TATCCGCTGT CGGCCGCGGG CTACAAGTCG
ATGGCGAAGA TGAAGAAGCT GACGCCGCGC CTGCAGCAGC TCAAGGAAAC CTACGGCGAC
GATCGCGCCA AGCTGCACCA GGCGATGGCC GAGATGTACA AGACCGAGAA GATCAACCCG
CTCGGCGGCT GCCTGCCGAT CCTGATCCAG ATTCCGGTGT TCATCGCGCT CTACTGGGTG
CTGCTCGCGG CGGTCGAGAT GCGCGGCGCG CCCTGGCTCG GCTGGATCAC CGACCTGACC
GCGCCCGACC CCTGGTACAT CCTGCCGATC ATAATGGGTG TCACCTCGAT CCTGCAGGTG
AAGCTCAACC CGCAGCCGAT GGATCCGATG CAGGCCAAGA TCATGATGAT CATGCCGGTC
GCGTTCACGG TCATGTTCGT GTTCTTCCCC GCGGGTCTCG TGCTCTACTG GGTCGTCAAC
AACATCCTGT CGATCGCGCA GCAATGGGCG ATCAACAAGC AGGTCGAGGG TAGTGGCAAA
CCCGCTCCCG CCAAGACCTG A
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| Protein sequence | MDNQRLILFI VFSFSLLLLW EAWQDKQAPA PATRPVAGAP AGSAAPTPST ALNAPAAAPA
QTGFAKGARA VVETDVLRAT IDANGGDLRE LQLLGYRETE DKNRVFTLFE DSRTRPYLAQ
SGFVGGGLPT HRSTFELTPG TYRLTGGAAR LEVPLVWNDA ARGVRVEKTF IFTRGSHEVA
VRTRVVNRGK EPLDLTPYYQ FTRHGEAPRG ESFFLYTYTG PAFYTDAKKF QKVPFTDIQD
GSAEFEKTAT NGWVGLVQHH FVAAWLPEES VKREYYARSL GEGLYSAGVI LAEGQLAPGQ
QKTFTVPLYA GPQSQAVLEK AAPGLDLARD YGWLTPLAYP IFWSLEKIER LVGNWGWAII
ILTILIKLAL YPLSAAGYKS MAKMKKLTPR LQQLKETYGD DRAKLHQAMA EMYKTEKINP
LGGCLPILIQ IPVFIALYWV LLAAVEMRGA PWLGWITDLT APDPWYILPI IMGVTSILQV
KLNPQPMDPM QAKIMMIMPV AFTVMFVFFP AGLVLYWVVN NILSIAQQWA INKQVEGSGK
PAPAKT
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