| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2824 |
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| Symbol | |
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| ID | 3672975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2906239 |
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| End bp | 2907579 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637711532 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_316582 |
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| Protein GI | 74318842 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAACC CGCTCCCGCC AAGACCTGAT CTCATCGCCG CCGTCGCGAC CGCCCCGGGG
CGGGGCGGGG TCGGGGTCGT ACGGGTGTCC GGCCCGGACG TCGGTCCGCT CGCCGTGGCG
ATCCTCGGAC GTCTCCCCGA GCCGCGCCAC GTCACGTATT GCCGTTTTCT CGATCGCGCC
GGAGCGCCGC TCGATGAAGG CATCGCGCTC TATTTCGCCG CGCCGCATTC GTTCACCGGC
GAGCACGTCC TGGAACTCCA GGGCCACGGC GGACCGGTCG TCCTCGATCT GATCCTGCAG
CGGTGCCTCG AACTCGGCGC GCGGCTCGCC GAGCCCGGCG AATTCTCGCG TCGCGCGTTC
CTGAACGGCA AGCTCGATCT CGCGCAGGCC GAGGCCGTCG CCGACCTGAT CGACGCGGCC
TCGGCCGAAG CGGCCCGCTC GGCGCTGCGA TCGCTCTCGG GCGAATTCTC GGCCCGCATC
GACGAACTCG TCGAACAGCT CGTCCGCCTG CGCACGCTGG TCGAGGCGAC GCTCGATTTC
CCCGACGAGG AAATCGACTT TCTCGAGCAG GCCGACGCCT TCGGCCGGCT GAAGGCGATC
GGCACGAGCG TCGCGGCGGT GCGCAGTCAG GCCAGACAGG GCGTGCTGCT GCGCGAGGGC
CTGACCGTCG TGCTGGTCGG CCAGCCGAAC GTCGGCAAGT CGAGCCTGCT CAACCGGCTC
GCCGGCTTCG ACGCGGCGAT CGTGACCGAG ATCGCCGGGA CGACGCGCGA CACCGTGCGC
GAGGCGATCC AGATCGAGGG CGTGCCGATC CACGTCATCG ACACCGCCGG GCTGCGCGAG
ACCAGCGACC CGATCGAGCA GTTGGGCATC GCGCGCAGCT GGGAGGCGGT CGAAAAGGCC
GACGTTGCGC TGCTGCTGGT CGACGCGGCG CACGGCGTCG GCGCGCACGA AGCGCAGATC
CTCGCGAAGC TGCCGGACGT TGTGCGCCTG ACCGTGCATA ACAAGATCGA TGTGGCAGGC
GAAGCGCCGC GCGCCACCGC GGACGAAATC TGGCTGTCGG CGAAGAGCGG CGAGGGTGTC
GATCTCCTGC GCGCGAAGCT GCTTCAGGCG GCGGGCTGGC AGGCCGCAGG CGAGGGCGCG
TTCATGGCGC GCACCCGTCA CCTCGACGCA CTCGACCGCG CGGCCCGCCA TATCGAACAG
GCCGGCGCCG TCGCGAGACA ATTGGAATTG TTTGCCGAGG AGTTGCGCCT CGCGCAAGCC
GCGTTGGCGG AAATCACCGG CGAATTCAGC GCCGACGCGC TGCTCGGCGA GATATTCGGC
AGCTTCTGCA TCGGAAAATA A
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| Protein sequence | MANPLPPRPD LIAAVATAPG RGGVGVVRVS GPDVGPLAVA ILGRLPEPRH VTYCRFLDRA
GAPLDEGIAL YFAAPHSFTG EHVLELQGHG GPVVLDLILQ RCLELGARLA EPGEFSRRAF
LNGKLDLAQA EAVADLIDAA SAEAARSALR SLSGEFSARI DELVEQLVRL RTLVEATLDF
PDEEIDFLEQ ADAFGRLKAI GTSVAAVRSQ ARQGVLLREG LTVVLVGQPN VGKSSLLNRL
AGFDAAIVTE IAGTTRDTVR EAIQIEGVPI HVIDTAGLRE TSDPIEQLGI ARSWEAVEKA
DVALLLVDAA HGVGAHEAQI LAKLPDVVRL TVHNKIDVAG EAPRATADEI WLSAKSGEGV
DLLRAKLLQA AGWQAAGEGA FMARTRHLDA LDRAARHIEQ AGAVARQLEL FAEELRLAQA
ALAEITGEFS ADALLGEIFG SFCIGK
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