Gene Tbd_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2820 
Symbol 
ID3672971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2902986 
End bp2903813 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID637711528 
Producthypothetical protein 
Protein accessionYP_316578 
Protein GI74318838 
COG category[S] Function unknown 
COG ID[COG4643] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.140761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC CGAATCAGCA ATTCCGCGAT GCAATCCAAG CGGCTGGCTT GATGCCTCCC 
GACGTGATCG AAGCCGACGG CAAGCTGCGG CGCTTCGCCA GCAACGGCAA GCGGGGCGAC
GTGGCGGGCT GGTATCTGCT GTTTGGCGAC GGCATTCCCG CTGGATGCTT TGGCGACTGG
CGCACCGGCT TTACCCAAAC GTGGCGGGCA GATGTTGGAC GCGCCCTGAC ACCCGCCGAG
GAACAGGCGC ACCGGGACAA GGCGCAAGCC ATGCGTCGCG AACGCGAAGC CGATGAAGAG
CGGCGCAAGG CTGAAGCCCA AACCCGCGCG GCGACAATCT GGAAAGTCGC ATCCCCCGCG
CCCGACGATC ATGCTTATCT AACCCGTAAA GGCATCAAGG CCCACGGGGT GAGACTTCAC
AAGGGGGCGC TGCTGATCCC TATGCGAGCC GATGGCGTGA TTCATTCGCT GCAATTCATC
GGCGAGGGTG GCGATAAGCG ATTCCTGTCC GGCGGGCGCG TGGCGGGATG CTATTTCAGC
ATCGGCGACT CGAAGGGCGC GGCGGCGCTT TGCATCGCGG AAGGCTTCGC AACCGGCGCG
ACGATTCACG AAGCAACAGG CTACCCCGTG GCGGTGGCCT TCAATGCGGG CAACCTGCTA
GCCGTGGCGA AGGCGATGCG CGAGAAATTC CCCGACCTGC CCCTGATCTT GTGCGCGGAC
GATGATAGGC ATACCCCCGG CAATCCCGGA CTGACCAAGG CGACCGAAGC GGCGCGGGCC
GTGGGCGGGC TGCTGGTTAT TCCTGAATTC GTGGGGGTGA CGGCATGA
 
Protein sequence
MFDPNQQFRD AIQAAGLMPP DVIEADGKLR RFASNGKRGD VAGWYLLFGD GIPAGCFGDW 
RTGFTQTWRA DVGRALTPAE EQAHRDKAQA MRREREADEE RRKAEAQTRA ATIWKVASPA
PDDHAYLTRK GIKAHGVRLH KGALLIPMRA DGVIHSLQFI GEGGDKRFLS GGRVAGCYFS
IGDSKGAAAL CIAEGFATGA TIHEATGYPV AVAFNAGNLL AVAKAMREKF PDLPLILCAD
DDRHTPGNPG LTKATEAARA VGGLLVIPEF VGVTA