Gene Tbd_2819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2819 
Symbol 
ID3672970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2900959 
End bp2902989 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content65% 
IMG OID637711527 
Producthypothetical protein 
Protein accessionYP_316577 
Protein GI74318837 
COG category[L] Replication, recombination and repair 
COG ID[COG5519] Superfamily II helicase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.14645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA CCGACTTTAA CGACATGGCG GCGCAGTCTG GCCTGGACGC CGTAAAACAC 
GCCATAACAA GCGCGGCGGC TTCGGTGATA TGCGAGGCTC AAGGCGGCAC CGAAAACGCA
ACAGCACGCG ATCTGGTGGG GCGGCAAAAC CCCGACACTG AAACCGGCGA ACCGGATGCG
GCATTGATGA ATTTCGGGGT ATCACAGGTA TCAGGGGTGC AGGCCAGTAA CGACGGGCTT
TCCGCTGATA CCCCTGCCGA TGCTGACGGG GTATCAGGGG TGTCTGCCAC GATGGCAAGC
AAAGAGCCTG GCATGGATGA GCGCCCATGC TTCCGCGTGT TTGATGGCTG GCTGGAACAC
GACGGTAGAA AGTATCAACC AGGCGTCTGG TATTTCGGCA TTAAGTCCGG CAAAGGTGAA
GCCCCCCCGG CGCTGACGGA AACCCGCGTT TGTTCCCCCC TACATATCGA GGCCGTGACC
TTCGACGGGC AGGACAACAA CTTCGGGCGG CTGTTGCGAT TCAAAAATAC GCTGGGGCGC
TGGCGTGAAT GGGCCATGCC GATGGAATTA CTCAAGGCTG GCGGCGATGA CCTGCGCGGC
GAACTGCTGG CGATGGGCGT CGAAATCGAC CCGACCGCAA AAACCTTGCT GGCGAATTAC
CTGCAAGCCA AGCCGCCGAA GCGGCAGATG CGCTGCGCGC TTCAAGTCGG CTGGTGCGGC
GATTCCTTCG TGCTGCCTGA TGCGGTAATC GGAACGGCGG CATCGGGCGT GATCTTCCAG
AGCGGCGAGC GCGGGCACGA TGAACACACC AGGGCCGGGA CGCTGGCCGG ATGGCGAGAG
GAAATCGCGG CGCGCGCTAT CGGTAATCCG CTGTTGCTGT TGGCGCTGTC TGCTTCTTTC
GCGGGGCCAA TGCTGGCGCG GTGCAATGCC GAGGGCGGCG GGGTGCATTT TGTGGGCGAT
TCTTCGACCG GCAAGACGAC CCTGCTGGAA GCGGGCTGTT CGGTTTGGGG CGGCGAGAAT
TACCGCCGAA GCTGGCGGGC GACTGCCAAC GGCATGGAAG GCGCGGCGGC GCTGTTTAAT
GATTGCCTGC TGGCCTTGGA TGAAATCAGC GAGTGCGATC CGCGCGAAGT CGGGGCCATC
GTCTACGCGC TAGGCAACGG GCGCGGCAAG CAACGCGCCG GGCGGACGGG CAGCGCTCGG
GCCGTGACGC GCTGGCGCTG TTTTGTCCTG TCGAGCGGCG AGCGCACCAT CGCCACGACG
ATGCAGGAAG GCGGACACCG GGCCAAGGCG GGGCAGGCGG TGCGGCTGCT GGATGTTCCG
GCGGCGCGTG TTTATGGCGC GTGGGACACC CTGCACGATC TGCCCAGCGG CACGGCGTTT
TCGGATGCGA TCAAGCGAGC AGCGGTGACG CACCACGGAC ACGCCGGGCG GGCTTTCCTT
GAAAGACTGA CGCGCGACGA TCAAGACTTT TGCGCCCTGC TGGAACGCTT CAAGGGGCTT
ATGGAGTTTT CCGCCGAGGG TGGTGAGGGA CAGGACAAGC GCGCGGCGGG ACGCTTCGCC
CTGCTGGCGC TGGCGGGTGA AGTGGCGACC GATTACGGCA TCACCGGCTG GTCGGAAGGC
GAGGCGATCA AGGCGGCATC GGAAGGTTTC CGGTTATGGC GAGCAGCGCG CGGACGCGGC
AACGATGAGC GGCGGCAAAT CCTGGACAGA GTTTCCGGCT TTATCGAGCG GCACGGCGAC
GGACGCTTCT CGGATGCTGA GAACAGCGGC GAAACCCCGA TACGCGACCG GGCGGGTTGG
TGGCGGGACA CTCCCGAAGG CCGCGAATAT CTGTTCACGG CGGACGGGAT GCGCGAGGCT
TTGAAAGGGT TTGACTTCGC CCGCGCGCTG GATGCCTTGC AGGTATCCGG GGCGCTGCCC
ACACCCGGCG CGGACGGCAA GCGGGCGCGG TTCTATCGCA TCGGCGGGCG CGGGGTGAAA
CTCTACCCCG TCCAAGCGGA CAAGCTGGGG GGCGATCATG GCGCTGGCTG A
 
Protein sequence
MSATDFNDMA AQSGLDAVKH AITSAAASVI CEAQGGTENA TARDLVGRQN PDTETGEPDA 
ALMNFGVSQV SGVQASNDGL SADTPADADG VSGVSATMAS KEPGMDERPC FRVFDGWLEH
DGRKYQPGVW YFGIKSGKGE APPALTETRV CSPLHIEAVT FDGQDNNFGR LLRFKNTLGR
WREWAMPMEL LKAGGDDLRG ELLAMGVEID PTAKTLLANY LQAKPPKRQM RCALQVGWCG
DSFVLPDAVI GTAASGVIFQ SGERGHDEHT RAGTLAGWRE EIAARAIGNP LLLLALSASF
AGPMLARCNA EGGGVHFVGD SSTGKTTLLE AGCSVWGGEN YRRSWRATAN GMEGAAALFN
DCLLALDEIS ECDPREVGAI VYALGNGRGK QRAGRTGSAR AVTRWRCFVL SSGERTIATT
MQEGGHRAKA GQAVRLLDVP AARVYGAWDT LHDLPSGTAF SDAIKRAAVT HHGHAGRAFL
ERLTRDDQDF CALLERFKGL MEFSAEGGEG QDKRAAGRFA LLALAGEVAT DYGITGWSEG
EAIKAASEGF RLWRAARGRG NDERRQILDR VSGFIERHGD GRFSDAENSG ETPIRDRAGW
WRDTPEGREY LFTADGMREA LKGFDFARAL DALQVSGALP TPGADGKRAR FYRIGGRGVK
LYPVQADKLG GDHGAG