| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2815 |
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| Symbol | |
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| ID | 3672966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2896265 |
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| End bp | 2897866 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637711523 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_316573 |
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| Protein GI | 74318833 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.386188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCT CCGAACTGGG GCTTGATCCC CTCATTCTCA AATCCGTACT CGCCGCCGGC
TACGAAAACG CCACGCCGGT TCAGCAGCAG GCGATTCCTG CCGCGCTGAG TGGGGGCGAC
CTGCTGGTGT CCTCGCACAC CGGCAGCGGC AAGACGGCCG CCTTCCTGCT GCCGTCGATC
CAGCGTCTGC TCGCCGAGCC GGCGGTCAAA AGCATCGGGC CGCGTGTGCT GGTGCTGACG
CCGACGCGCG AACTCGCGCT GCAGGTCGAA AAGGCCGCGA TGACCTACGG CAAGGAGATG
CGCCGCTTCC GCACCGCCTG TCTGGTCGGC GGCGCCCCCT ATGGCCTGCA GCTCAAGCGA
CTCTCGCAGC CGGTCGACGT CGTGGTCGCC ACGCCGGGTC GCCTGATCGA CCATCTCGAG
CGCGGCAAGA TCGACTTCTC GCGCCTCGAG GTGCTCGTGC TCGACGAAGC CGACCGCATG
CTCGACATGG GCTTCGTCGA CGACATCAAG GCGATCGCCG CGCGCTGTCC GGCCGAACGG
CAGACCCTGC TGTTCTCGGC CACGCTCGAC GGCGTCGTCG GCAACCTCGC ACGCGAACTG
ACCCGCGACG CGCAACGCAT CGAGATCGAG GCGGTGCCGC ACAAGGAAGC CAAGATCGAG
CAGCGCCTGC TGTTCGCCGA CAACATGGAC CACAAGAACC GCCTGCTCGA CGCGCTGTTG
CGTGACGTCG AGATGGTGCA GGCGATCGTG TTCGCATCGA CCAAGCGCAG CACCGAGGAG
ATTTCCGACC TGCTCGCCGA AAGCGGCTTC GCCTCCGACG CCTTGCACGG TGACATGCAG
CAGGGCCAGC GCAACCGCGC GCTGCAGCGG CTGCGCGAAG GGCGCACCCG CGTGCTCGTC
GCGACCGACG TCGCGGCCCG CGGCATCGAC GTCGCCAGCA TCAGCCACGT CATCAACTTC
GATCTGCCGC GCCAGGCCGA GGACTACGTC CACCGGATCG GCCGCACCGG CCGCGCGGGT
CGTACCGGCA TCGCGGTGAG CTTCGCCGGC ATGCGCGAGG GCGGACTGGT GAAGAACATC
GAGCGCTACA CCGGCAACCG CATCGAGGTG CACACCTTGC CCGGGCTGGA GCCGACGCAG
CGGCCGTCGA CCGGGCGACC CGGCAATGGC CGGCCGCGCG GCAACGGTCC GCGCGGGGGC
TACGAGAAGC GCAGCTTCGG GGATCGCAGC GAGCCGCGCA GCTACGGCGA CCGGCCCCGT
GGCGATAGCC GCGACAACCG CGACCGCGGC TACCGCGGCG ACGCCCGTCG TAACGACGGC
GCACCCGCCC GTCGCTTCGA CAATGGCGTC CGCGGGCCGT CCGACGTGCC GCGCATGACC
AGCGAGCAGA CGGCAGGGCC TCGTGGCGCC GCCTCCAAGC CCGAGGTTAA TGGCAACAGC
GTCGAGTACT GGGAGAAGCG CGAACGCGAG GCCAAGGCCA AAGCCGCCAC GGGCCGCTCC
TACGGCGACC GCGGCAACGC CGCGCGTCCG GCACGTGGCT ACGGCAACGA GAACCGTGGC
GGGGCAGGGC GCGGCGGGGT GCGCGGGCGC TTCAAGGACT GA
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| Protein sequence | MSFSELGLDP LILKSVLAAG YENATPVQQQ AIPAALSGGD LLVSSHTGSG KTAAFLLPSI
QRLLAEPAVK SIGPRVLVLT PTRELALQVE KAAMTYGKEM RRFRTACLVG GAPYGLQLKR
LSQPVDVVVA TPGRLIDHLE RGKIDFSRLE VLVLDEADRM LDMGFVDDIK AIAARCPAER
QTLLFSATLD GVVGNLAREL TRDAQRIEIE AVPHKEAKIE QRLLFADNMD HKNRLLDALL
RDVEMVQAIV FASTKRSTEE ISDLLAESGF ASDALHGDMQ QGQRNRALQR LREGRTRVLV
ATDVAARGID VASISHVINF DLPRQAEDYV HRIGRTGRAG RTGIAVSFAG MREGGLVKNI
ERYTGNRIEV HTLPGLEPTQ RPSTGRPGNG RPRGNGPRGG YEKRSFGDRS EPRSYGDRPR
GDSRDNRDRG YRGDARRNDG APARRFDNGV RGPSDVPRMT SEQTAGPRGA ASKPEVNGNS
VEYWEKRERE AKAKAATGRS YGDRGNAARP ARGYGNENRG GAGRGGVRGR FKD
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