| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2781 |
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| Symbol | |
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| ID | 3672847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2861158 |
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| End bp | 2863317 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637711489 |
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| Product | replication restart DNA helicase PriA |
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| Protein accession | YP_316539 |
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| Protein GI | 74318799 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.360664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCGA TCGTCCAGGT TGGACTCGAC ACGCCGCTTG ACCGTCTGTT CGATTACAGC
GCGGGCGAAG CCGCGGCGGA CCTCGCCCCC GGCCGCCTCG TCGAAGTACC CTTCGGCCGC
ACCCGGCAGG TCGGCGTGGT GCTCGGCAGC CTTGCTGAGA CGGCCGTCGA CGGGATCAAG
CTGAGGACAA TCCTTCGCGT CCTCGACGAC CGCCCCGCGC TCGCGCCGGA AGTGCTGCGC
TTGGCACGGT TCTGCGCCGA CTACTACCAC TATCCGCTGG GGGCGGTCCT GCTCGCGACC
CTTCCCCCCC GCCTGAAGAA CGCGACCCCC TACCTCGCCG ACACGCCGTG GCTCGTCGTC
ACCGCGCTTG GCCGCGCCGA GGGACCCGCG CCGAGGGCCC GCGCGCAGCA TGCCCTGCTC
GAAGCCTTGC GCGAGGCGCC GCAGGCGCGT GCATACCTGC GCGCCATCAA GCAGGGACGC
CACGCGGCCG CGCTCGTCGC CGCGGGCTGG GCCGAATGGA CCCGCCTGCC GCCCGAGGCC
GAACCCCCGC CGGAAGGCCC TCGCCCGGCA CCGGCAACGG CCGAGCAGCA GGCCGCGCTC
GATGTGTTGC TGCCGACGCT CGGCGAATTC GCCGTGCATC TCGTGCACGG CGTGACCGGC
AGCGGCAAGA CCGAACTCTA TCTGCGCGTC ATCGACGCCG TGCTCGCCGC CGGTCGGCAG
GCGCTGGTAC TGATTCCGGA AATCGCGCTG ACGCCCCAGC TCGAAGGACA CTTCCGCGCC
CGCTTTCCGG GCCGGCGCTT CGCGACCCTG CACAGCGGGC TTGCCGAGGC CGCGCGCACC
GAAAACTGGC TCGCCGCAGC CGACTGCGAC GTCCTGCTCG GCACCCGCCT CGCCGTATTC
GCGCCGCTGC CGCGGCTGGG CCTGATCGTC GTCGACGAAG AACACGACAC CTCATTCAAG
CAGCAGGACG GCTTGCGCTA TTCGGCGCGC GACGTCGCGA TCGCCCGCGG CAAGCAGGCC
GGCGTTCCGG TGCTGCTCGG GTCGGCCACG CCATCGCTCG AAAGCTACGC GCAGGCCCGC
AGCGGCCGCT ACCGGCTGCT CGAACTCAGG CAGCGCGCGA TCGCCGCCGC GCGCCTGCCC
GAGATCGAGC TCGTCGACCT GCGTCACGTT CCGCAGGAAA ACGGCCTGAC CGCGCCGGCC
CTCGCGGCCC TGCACGCGAC GCTCGCACGC GGCGAGCAGA GCCTGGTCTT CCTCAATCGC
CGCGGCTATG CGCCCGCGCT GTACTGTCCG AGCTGCGCCT GGGTCTCGCC CTGCCCGCAC
TGCTCGGCAC GGCTGGTCCT GCACCGCGGC GCGCAGCGGC TGAAATGCCA TCACTGCGGC
TTCGAGACAC GGATCCCGAG CGCATGCCCG GACTGCGGCG AGCCCGACCT GAAGCCGCTC
GGGCAGGGCA CTCAGCGCGT CGAGGAAACG CTCGCGACGC ACCTGCCGGG TGCGCGCATC
CGCCGCATCG ACCGCGACAC GATGCGCCCG CGCGCCTGGG CCGAGCTCGG CACGGCCGTG
CACGGCGGCG AAGTCGACGT GCTCGTCGGC ACGCAGATGC TGGCCAAGGG CCACGACTTC
CCGAACGTGA CGCTGGCGCT GATACTCGAC ACCGACGGCG CGCTCTACAG CCCCGACTTT
CGGGCGACGG AACGGCTTTT CGCCCAACTC ATGCAGGTCG CCGGGCGCGC GGGCCGCGCG
GAAAAACCCG GCCGCGTGCT GATCCAGACG GCGTTTCCCG ACCACCCGCT GTTCCGTCAC
CTGCAGCGAC ACGACTACGC GGCCTACGCA CGCGAACTGC TCGCCGAACG CAAACAGCTC
GAACTGCCCC CGTACACGCG GCAGATCCTC GTGCGCGCCG AAGCGACCAC GATGGACGCC
GCGCTCGCCT TCCTGCGGCG CGCGGCGGCG CTCGCCCCCG ATGCGCCCGG GGTCAGCGTG
TTCGCTGCGA CGCCCGCGCC GATGGCCCGC GTTGCCAAGC TCGAACGCGC GCAACTTCTG
ATCCAGTCGC CCTCACGCGC GGCGCTGCAG GCCTTCGTGC GGGACTGGCG GCCGCGTCTC
GAAACGATCC GGCCGCGCCC CGCGCGCTGG TCGCTCGACG TCGACCCGCT CGTGTTTTGA
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| Protein sequence | MTPIVQVGLD TPLDRLFDYS AGEAAADLAP GRLVEVPFGR TRQVGVVLGS LAETAVDGIK
LRTILRVLDD RPALAPEVLR LARFCADYYH YPLGAVLLAT LPPRLKNATP YLADTPWLVV
TALGRAEGPA PRARAQHALL EALREAPQAR AYLRAIKQGR HAAALVAAGW AEWTRLPPEA
EPPPEGPRPA PATAEQQAAL DVLLPTLGEF AVHLVHGVTG SGKTELYLRV IDAVLAAGRQ
ALVLIPEIAL TPQLEGHFRA RFPGRRFATL HSGLAEAART ENWLAAADCD VLLGTRLAVF
APLPRLGLIV VDEEHDTSFK QQDGLRYSAR DVAIARGKQA GVPVLLGSAT PSLESYAQAR
SGRYRLLELR QRAIAAARLP EIELVDLRHV PQENGLTAPA LAALHATLAR GEQSLVFLNR
RGYAPALYCP SCAWVSPCPH CSARLVLHRG AQRLKCHHCG FETRIPSACP DCGEPDLKPL
GQGTQRVEET LATHLPGARI RRIDRDTMRP RAWAELGTAV HGGEVDVLVG TQMLAKGHDF
PNVTLALILD TDGALYSPDF RATERLFAQL MQVAGRAGRA EKPGRVLIQT AFPDHPLFRH
LQRHDYAAYA RELLAERKQL ELPPYTRQIL VRAEATTMDA ALAFLRRAAA LAPDAPGVSV
FAATPAPMAR VAKLERAQLL IQSPSRAALQ AFVRDWRPRL ETIRPRPARW SLDVDPLVF
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