| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2779 |
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| Symbol | |
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| ID | 3672845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2858747 |
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| End bp | 2859817 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711487 |
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| Product | uroporphyrinogen decarboxylase HemE |
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| Protein accession | YP_316537 |
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| Protein GI | 74318797 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.313146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC TCAAGAACGA TACCTTCCTG CGCGCGCTGC TGCGCCAGCC GACCGAGTAC
ACGCCGCTGT GGCTGATGCG CCAGGCGGGG CGCTATCTGC CCGAGTACAA CGCGACGCGC
GCGCGGGCCG GCGATTTCCT GACGCTCTGC AAAACGCCCG ACCTCGCGAC CGAGGTCACC
CTGCAGCCGC TCGCGCGCTA CCCGCTCGAC GCCGCGATCC TGTTCTCCGA CATTCTGACG
GTCCCCGACG CGATGGGCCT GGGCCTGTAC TTCTCGCAAG GCGAGGGGCC GCGCTTCGAG
CGCCCGCTGC GCGACGAATG GGAAATCCGC GATCTCTCGG CGCCCGATCC GACCGACCAC
CTGGGCTACG TGATGGACGC CGTGCGCTCG ATCCGCCGCG CCCTCGATGG CGCCGTGCCG
CTGATCGGCT TTTCCGGCAG CCCCTACACG CTCGCCTGCT ACATGATCGA AGGCGGCAGT
TCGGACGACT ACCGCCACAT CAAGACCATG CTCTACCGCC GCCCCGACCT CTTACATCGC
GTCCTCGAGG TCAACACACG TGCGGTCACC GATTACCTCA ACGCCCAGAT CGAAGCCGGC
GCCCAGGCCG TGATGATCTT CGACTCCTGG GGCGGCAGCC TCACGCCGCA CGGCTACCGC
GAGTTCTCGC TCGACTACAT GGAACGCATC GTCAGTGGGC TGATCAAGGA GCGCGAAGGC
CGCCGCATTC CGAGCATCAT CTTCACCAAG GGCGGGGGCA ACTGGCTCGA AGCGATGGCG
GGCGCCGGTG CCGACGCGGT CGGGCTCGAC TGGACGCTCG ACATCGGCGA GGCGCGCCGC
CGCGTCGGCG ACCGCGTCGC GCTGCAGGGC AACCTCGACC CCTGCGCGCT CCACGGCACG
CCCGAGAGCA TCCGCGCCGA GGCCGAACGC ATCGTCGACG CCTACGGCAA CCATCCGGGG
CACGTGTTCA ATCTCGGGCA CGGCATTTCG CAGTTCACCG ATCCCGCCAA CGTCGCAGTA
CTGGTCGACG CCGTCCACAG CCGCAGCCGC GCAATCCGCG CCGGCGCGTG A
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| Protein sequence | MSALKNDTFL RALLRQPTEY TPLWLMRQAG RYLPEYNATR ARAGDFLTLC KTPDLATEVT
LQPLARYPLD AAILFSDILT VPDAMGLGLY FSQGEGPRFE RPLRDEWEIR DLSAPDPTDH
LGYVMDAVRS IRRALDGAVP LIGFSGSPYT LACYMIEGGS SDDYRHIKTM LYRRPDLLHR
VLEVNTRAVT DYLNAQIEAG AQAVMIFDSW GGSLTPHGYR EFSLDYMERI VSGLIKEREG
RRIPSIIFTK GGGNWLEAMA GAGADAVGLD WTLDIGEARR RVGDRVALQG NLDPCALHGT
PESIRAEAER IVDAYGNHPG HVFNLGHGIS QFTDPANVAV LVDAVHSRSR AIRAGA
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