Gene Tbd_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2769 
Symbol 
ID3672835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2851281 
End bp2852735 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content69% 
IMG OID637711477 
Productsignal transduction histidine kinase 
Protein accessionYP_316527 
Protein GI74318787 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.678535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.666282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC CTTCAGCCCG CATGCTTTCC GGTCCCTATT ACCCGCGCTC GTTCACGATC 
CTCGTGATCG CCGCCATGGG CGTGCTCATC GTGCCGCTCG CGAGCGGGCT CATCAACGCA
GTGCACGTGC TGCAGGGCGT GCTCGACACC CAGCGGCAGT TCACGCGCGA CAGCCTCGCG
GTCACGCGCG ACGTGCGCCA GGTCGTCGAC TCGGTCAGCC AGCTGCAGCG CGCGGCCGGG
CAGTACCACC TGCTCCAGGA CAAGGAGTTC GGTCCGGCGC TGCACGCGCG CTTCGACGCG
CTGCAGAAGC AGCTCGCCGA ACTCGAGCCG CGCCTGAGCG ACCCGCTCGC GCGCAGCACG
CTGGCGACGC TGCGCACGCG CAGCCTCGCG CTCTACCGCA CGCTGCAGCC CGGCCGCTTT
CTCGACAGCG AGCGTTTCCA CGCGCTCGAC CCGGCCTTCG ACGATCTGCA CGTCGGCGCC
GAAAACCTGC TGCACGAGGC CGACACCGCG GTCGAGGGAG AACTGCAAGT ACTCGAGGCA
ACCGTGCAAG CGACGCAACA ACGCCTGATT GCGCTCGGGC TCGCGCTGAT CCCGCTGACG
CTGCTCCTCG CGGCCGTGTT TTCCTGGCTC ATCAACCGCC CGATCAAGCA GCTCAAGGCC
TCGATCCAGC AGCTCGGACA GGCCGATCTC GGCCCGCTGC CCGCGATCAG CGGGCCGCAG
GACATCGTCG AACTCGGGCG CGAGATGGAC TGGCTGCGCC AGCGCCTGCA GGCGCTCGAG
GAACAGAAAC TGCAGTTCCT GCGCCAGGTC TCGCACGAAC TCAAGACCCC GCTGGCCTCG
CTGCGCGAAG GCGTCGCCCT GCTCGGCGAC GAACTCGCCG GCAGCCTCAA TCCGCGTCAG
CGCGCGATCG TGACGATCAT GGATACCGGC AGCCGCGACC TGCAGCAGCG CATCGAGGAT
CTGCTCCGCT ACGGCAACCT CCAGGATGCG CGCCCGCCCG CGGTGCCGGT GGCGCTAGCC
GAGGCGCTCG CGAGCGTGCT CGAACGCCAG CGCCTCGCGC TCGAGGCGCG CCGCATCGTG
GTCGAGACCG AATTCGCGGC GCCCGCCGTG CTCGCCGATC GCGCACTGCT CGAAACCGTG
CTCGACAACC TGCTCTCGAA TGCGGTCAAA TTCAGCCCGG ACGAGGGACG CATCCTGGTC
AGGAGCGAAG TCGCCGACGA CGCCGTCGTG CTCTGGTTCT GCGACCAGGG CGAAGGCATC
CCCGAAGCCT TGCGCGCCCG CGTCTTCGAG CCCTTCTTCC AGGGTCCGCG CCAGCCCGCG
AGCACGGTCA AGGGCAGCGG GCTCGGCCTG TCGATCGTGC GCGAATCGGT GCTCGCCGCC
GGCGGCGCGA TCGGCATCGT CGACGCACCG CCCTGGTCCA CCTGTTTCCG TCTAAGCCTG
CCGCTCCCAC CATGA
 
Protein sequence
MSAPSARMLS GPYYPRSFTI LVIAAMGVLI VPLASGLINA VHVLQGVLDT QRQFTRDSLA 
VTRDVRQVVD SVSQLQRAAG QYHLLQDKEF GPALHARFDA LQKQLAELEP RLSDPLARST
LATLRTRSLA LYRTLQPGRF LDSERFHALD PAFDDLHVGA ENLLHEADTA VEGELQVLEA
TVQATQQRLI ALGLALIPLT LLLAAVFSWL INRPIKQLKA SIQQLGQADL GPLPAISGPQ
DIVELGREMD WLRQRLQALE EQKLQFLRQV SHELKTPLAS LREGVALLGD ELAGSLNPRQ
RAIVTIMDTG SRDLQQRIED LLRYGNLQDA RPPAVPVALA EALASVLERQ RLALEARRIV
VETEFAAPAV LADRALLETV LDNLLSNAVK FSPDEGRILV RSEVADDAVV LWFCDQGEGI
PEALRARVFE PFFQGPRQPA STVKGSGLGL SIVRESVLAA GGAIGIVDAP PWSTCFRLSL
PLPP