| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2751 |
|---|
| Symbol | |
|---|
| ID | 3672817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2831136 |
|---|
| End bp | 2831987 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637711459 |
|---|
| Product | transmembrane protein |
|---|
| Protein accession | YP_316509 |
|---|
| Protein GI | 74318769 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC CGCCGCTCCA TGCTCCACGT TCCTGGCGCC CGGCGCCGCT TCTGTGGACG
ACTTTCATGC TGCACGGCGG CGTCATCGGC TGGCTGCTCG CGGCGCCGCA GCATTGGCCC
TGGGCGCTCG GTACGCTCGC GGTCAACCAT CTGGCCTTGA CCCTCGCCGG GTTGCTGCCG
CGCAACGGCG CGCTCGGCCT CAACTGGTGG CGCCTGCCGC GCGCCGCATC CGCCGGACAC
GTCGCACTCA CGATCGACGA CGGTCCCGAT CCCGAGGTCA CCCCGCAGAT CCTCGACCTG
CTCGACCGCT ACGCGGCGCG CGCGAGCTTT TTCTGCATCG GCGAAAAGGC GCTGCGCCAC
CCGGAGCTGT GCCGCGAGAT CGTGCGCCGC GGCCACGCGA TCGAGAACCA CAGCCAGCAC
CACCGTCATC ATTTTTCGCT GTTCGGCCCG CGGCGCATGG CGCGTGAAGT CGACGACGGC
CAGGAGACCC TCGCCGCGCT GACCGGCGAG CGCCCGCTGT TCTTCCGTCC GACCGCCGGC
CTGCGCAACC CCTTCCTCGA GCCCATCCTC GCGCGCTTGG GCCTGCGCCT CGCAAGCTGG
ACGCGCCGCG GCTACGACAC GCGCAACCGC GACGCCGACG ACGTGGCCCG CCGGCTGACC
GCGACGCTCG CGGCGGGCGA CATACTCCTG CTGCACGACG GCAACGCCGC GCGCACCGCA
GCCGGAGAGC CCGTCATCCT CGCCGTGCTG CCGTGCGTCC TCGACGCGAT CGCGGCCGCC
GGCCTGCATT CCATCACCCT GCGCGCCGCG CTCGAACTCA CCACTCGCCA TGCCGACCGA
CATTCTGCGT AA
|
|---|
| Protein sequence | MNPPPLHAPR SWRPAPLLWT TFMLHGGVIG WLLAAPQHWP WALGTLAVNH LALTLAGLLP
RNGALGLNWW RLPRAASAGH VALTIDDGPD PEVTPQILDL LDRYAARASF FCIGEKALRH
PELCREIVRR GHAIENHSQH HRHHFSLFGP RRMAREVDDG QETLAALTGE RPLFFRPTAG
LRNPFLEPIL ARLGLRLASW TRRGYDTRNR DADDVARRLT ATLAAGDILL LHDGNAARTA
AGEPVILAVL PCVLDAIAAA GLHSITLRAA LELTTRHADR HSA
|
|---|
| |