| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2750 |
|---|
| Symbol | |
|---|
| ID | 3672816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2828818 |
|---|
| End bp | 2831139 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637711458 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_316508 |
|---|
| Protein GI | 74318768 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4258] Predicted exporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.536126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCGCA GCGGGCGACT CGCGCTTGCC GTGTGGCTCG TTTTCCTCGC GGCCTGCGGC
TGGCTCGCGA CCCGCGCCGA CTACACGGCC GACCTCTCGG CCTTCCTGCC GCGCGCGCCG
ACGCCCGAAC AGCAATTGCT CGTCGACCAG CTGAAGTCGG GCGTCGCCTC GCGCCTGATC
CTGATCGGCA TCGAAGGCGG CGACAGCACC GCGCGCGCGC GCGCCTCGCG CGAACTCGCG
GCGAGGCTGC GCGCCGACCC GCGTTTCCTG CACATCGCGA ACGGCGAGAC GCCGGCACTG
CAACGCGATC GCGAAATCCT GTTCGCGCAT CGCTACGTGC TGAGCCCGGC GGTGGACGCC
GGGCGCTTCA CGGCCGAAGG GCTGCGCGCC GGCGTCGAGG ACAGCCTCGG CCTGCTCGCA
ACCTCGACCG GGCTCGTCAG CAAGGCCTTG TTGCCGCGCG ACCCGACCGG CGAATTCCTC
CAGGTGCTCG ACGCGCTCGA AGACGGACAG CAGCCCCGCC TTGTCGACGG GACGTGGGCC
TCGCGCGACG GCACGCGCGC GCTGCTCCTC GCACGCACCC GCGCCGAAGG CGCCGACACC
GATGGACAGG AGCAGGCTGT CGACGCCATC CGCAGCGCAT TCGCGGCCGT AGGCGCGCCG
CCGCTGCGCC TCGCGATGAC CGGCCCCGGA CCGTTCTCGG TAACCGCGCG CGCGACGATC
AAGGACGAGG TCACGCTGCT CTCGGGCCTC GGCGCCCTTG CGATCGTCAG CCTGCTGCTC
GCGGTGTATC GCTCGCCGCA CGCGCTGCTG CTGAGTCTCG TGCCCGTGGT CTCGGGGGCG
CTCGCCGGGG TCGCCGCGGT GAGCCTCGGC TTCGGCGTCG TGCACGGCGT CACGCTCGGC
TTCGGCACGG CGCTGATCGG CGAAGCGGTC GACTATGCGA TCTACCTGCT CATGCAATCG
CGGCAGGCAG CGGCAGACCC GCGCGCGTCG ACGAAGGCAT TCTGGCCGAC GGTGCGGATC
GGCGTGCTGA CCTCGGTCTT CGGCTTCGCC TCGCTGCTTT TCTCCGGCTT TCCCGGCCTC
GCCCAGCTCG GCCTTTACGC GATCGCAGGG CTCGCCGCGG CCGCACTCGT CACGCGCTTC
GTGCTGCCTC ATCTGGTACC GGCGACGCTC GAGCCGCCCG CCGTCGATCG GCTCGGGCAG
CGCCTGCTCG GCTGGAGCGA ACGGGCACCA CGGCTGCGCG GCATCGTGCT CGCTCTCTTC
GTCGCCGCCT GTGGCGTCAT CGCATTCGAG CACGGCGGTA TGTGGAACCG CGAGCTCGCG
GCCCTGAGCC CGGTTCCGGC CGCCGACCAG GCGCTCGATG CAGCGATGCG GGCCGACCTC
GGTGCCCCCG ACGTCGCCCA CCTCGTGATC GTGAGCGCGC CGAGCGCGGA GGCCGCGCTC
GCGGCGAGCG AACGCGCGGC GCGCGCGCTC GACGCGCTCG TCGCCGCCGG CACGATCGCG
GGCTACGAAA GCCCGGCGCG CTACCTGCCG AGCGCGGCGA CGCAGCGCGC GCGGCTGGCC
GCGCTGCCGG ACGACGCACA ATTGCGCCAG CGCTTCGCCG CCGCGGCGGC CGGCCTGCCG
CTGCGCGCCG AGCGTTTCGA GCCTTTCTTC GCGGACGTCG CGGCTGCGCG GCACGCGGCG
TCCTTGACCC GTAGCGATCT CGAAGGCAGC GCGCTGGCCG CAGGCGTCGA CGCCCTCCTG
GTGCGCTCGT CCGGCGGCTG GACCGCCCTC ATGCCCCTGC GCGCCGCGAA CGGCGCGCTC
GACGCAGCCG CGGTCAAGGC CGCGCTCGCC GCGGCCGGCG CCCACGACGC CCATTTCGTC
GATCTCAAGC GCGAGTCCGA TCGCCTGCAC AGCGGCTATC TGCGCGAAGC GAGCCTGCTG
TCGCTCGCTG GCCTCGCGGC GATCCTCGCG CTGCTCGGGG TCGTCACGCG TTCGCCGCGC
CGCGTGTTCC ATATCGTCGC GCCGCTCGCG GCGGCCGTCG CCGTCGTCGT CGCCGGCCTC
GTGCTTGCCG GGCGGCCGCT CATCATCCTG CACCTGGTCG GCATGCTGCT GGTGGTCGCG
GTCGGCTCGA ACTACGCCCT GTTCTTCGAC CAGGGTGCCG CCGCGGGCGG TGTCCAGGCG
CGCACGCTGG TTTCGCTCTT GCTCGCCAGC GCGACGACGG TCGCGGGCTT CGGCGTGCTG
GCGTTTTCGA GCGTGCCGGT GCTCAACGCG ATCGGCACGA CGGTCGGCCC CGGGGTGGTC
CTCGCCCTGG TCTTTTCCGC GATCCTCGCG CGCCGCCCAT GA
|
|---|
| Protein sequence | MSRSGRLALA VWLVFLAACG WLATRADYTA DLSAFLPRAP TPEQQLLVDQ LKSGVASRLI
LIGIEGGDST ARARASRELA ARLRADPRFL HIANGETPAL QRDREILFAH RYVLSPAVDA
GRFTAEGLRA GVEDSLGLLA TSTGLVSKAL LPRDPTGEFL QVLDALEDGQ QPRLVDGTWA
SRDGTRALLL ARTRAEGADT DGQEQAVDAI RSAFAAVGAP PLRLAMTGPG PFSVTARATI
KDEVTLLSGL GALAIVSLLL AVYRSPHALL LSLVPVVSGA LAGVAAVSLG FGVVHGVTLG
FGTALIGEAV DYAIYLLMQS RQAAADPRAS TKAFWPTVRI GVLTSVFGFA SLLFSGFPGL
AQLGLYAIAG LAAAALVTRF VLPHLVPATL EPPAVDRLGQ RLLGWSERAP RLRGIVLALF
VAACGVIAFE HGGMWNRELA ALSPVPAADQ ALDAAMRADL GAPDVAHLVI VSAPSAEAAL
AASERAARAL DALVAAGTIA GYESPARYLP SAATQRARLA ALPDDAQLRQ RFAAAAAGLP
LRAERFEPFF ADVAAARHAA SLTRSDLEGS ALAAGVDALL VRSSGGWTAL MPLRAANGAL
DAAAVKAALA AAGAHDAHFV DLKRESDRLH SGYLREASLL SLAGLAAILA LLGVVTRSPR
RVFHIVAPLA AAVAVVVAGL VLAGRPLIIL HLVGMLLVVA VGSNYALFFD QGAAAGGVQA
RTLVSLLLAS ATTVAGFGVL AFSSVPVLNA IGTTVGPGVV LALVFSAILA RRP
|
|---|
| |