Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2684 |
Symbol | |
ID | 3672413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2760861 |
End bp | 2761565 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637711390 |
Product | HNH nuclease |
Protein accession | YP_316442 |
Protein GI | 74318702 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02646] conserved hypothetical protein TIGR02646 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.165249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACCCG TCGATAAGGG TAAGGATCTG GGGAGTTTCA AGCCTTACAA CAAGGCCTGC GCTCCTTTGC AGGACAGGTT AGGAGAGTAT TGTTCATATT GTGAGCGCTG GATTGCGGCC GCAATTGAAG TCGAGCACAT ACTCCCTAAG AAAGCCAATC CGTCTCAGAA GTATAGATGG AGCAATTTTT TGCTCGCCTG CAAGAATTGC AATACAGGCA AGGGATCTGA TCAAATCATA GTGACCGACT ACCTTTGGCC GGATTTAGAC AACACCTTCT TGGCCTTCTG TTATGACGAT GAAGGTCGCG CATACCCAAA CCCTAGATTG CCGCCGGCGA TCCTAGAAAA AGCAAAAGCA ACCTGGACGC TGACGAACCT AAACTGGCAC CCAGACACTA CATTCACCGG AATGGTAGCG CCGTCAGAGA AGGATCATCG GCATTCGCAC CGAAAGCAGG CATGGATATA CGCAAGCGAC AAGCGCAATC AGTTGCTTCA GTACGACACG CCGGACAGAA GAGTATCGGT AGCGAAAGAT GCTCTTCAGC GAGGCATGTT TTCCGTATGG ATGACGGTCT TTAACACCAC ATCTGAGTTG GATCGTGAAA TACGAAGACT GCTAATAGAG AATTTTGTAG GAACAGCCAC TAATTGTTTT GACCGGCTTG GCAATGCACA TAGAAGCTCA ACGGGTCAAA TATGA
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Protein sequence | MRPVDKGKDL GSFKPYNKAC APLQDRLGEY CSYCERWIAA AIEVEHILPK KANPSQKYRW SNFLLACKNC NTGKGSDQII VTDYLWPDLD NTFLAFCYDD EGRAYPNPRL PPAILEKAKA TWTLTNLNWH PDTTFTGMVA PSEKDHRHSH RKQAWIYASD KRNQLLQYDT PDRRVSVAKD ALQRGMFSVW MTVFNTTSEL DREIRRLLIE NFVGTATNCF DRLGNAHRSS TGQI
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