| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2662 |
|---|
| Symbol | |
|---|
| ID | 3672391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2735850 |
|---|
| End bp | 2737004 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637711368 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_316420 |
|---|
| Protein GI | 74318680 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATG AGGCGCAGCC GACGATGACT GCCCTGCCGA TCCTGCCGGG TGCGACGCTC
GGCATCCTGG GAGGCGGTCA ACTCGGCCGC ATGTTCACGA TCGCCGCACG CACCATGGGC
TACAAGGTCA TGGTGCTCGA TCCTGACTTC GCGAGTCCGG CCGGGCAGAT GGCCGACGTC
CACCTGCAGG CCGACTACAC CGACCACGGC GCCCTGCGCC AGCTCGGCGC GGCCTGCGCC
GCGGTGACGA CCGAATTCGA GAACGTACCG GCACAAAGCC TGATAGAACT CGCGAACCAT
TGCCGGGTCT CGCCCGGTGC CGCCGCAGTC GCGATCGCGC AGGACCGCAG CCACGAGAAA
TCCTGGCTCG CGCAGAACGG TTTCGCGACG GCGCCCTTCG CGCTGGTGTA CAGCGAAGGC
GACCTCGATG CGGCGCTCGC CGAGGTCGGC ACCCCCGCGC TGCTCAAGGT CGCGCGCTTC
GGCTACGACG GCAAGGGACA GGCGCGCGTC ACCGACCGCG ACGGCGCGCG CGCGGCTTTC
GCCGAATTCG GTGCCCAGCC CTGCGTGCTC GAAGGCTTCG TCAAGCTCGA AGGCGAGCTA
TCGGTCGTCC TCGCGCGCGA CGACGCGGGG CATTGCGCGA CCTTCCCCGT CGCCGAAAAC
CGCCACGAGC AGGGCATCCT CGACGTCTCG ATCGTCCCCG CCCGTGTCGC CGATTCGCTC
GCCGATGCCG CGCGCACGAT GGCGCAAGAC ATCGCAGGAA AACTCGCCTA CGTCGGCGTC
ATGGCGGTCG AGTTCTTCGT CGTCGACGGT CGCCTGCTCG TCAACGAGAT CGCCCCGCGC
CCGCACAACT CGGGGCATTA CACGCTCGAC GCCTGCGTCA CCGACCAGTT CGAGCAGCAG
GTGCGCGCGC TATGCGGCCT GCCGCTCGGC GACACGCGCC TGCTCTCGCC GGTCGCGATG
GTCAACATAC TCGGCGACCG CTGGCACGAC GGCGGGCCGC ACTGGTCGGC GCTGCTCGCG
CATCCGGCGA TCAAGCTGCA TCTGTACGGC AAGGAGACCG CGCGCCCCGG CCGCAAGATG
GGGCACTTCA ACGTGCTCGA CACGGACGTC GAGGCAGCGC TGAAACTCGC CGAAGCGATG
CGCGATGCGC TCTAG
|
|---|
| Protein sequence | MSNEAQPTMT ALPILPGATL GILGGGQLGR MFTIAARTMG YKVMVLDPDF ASPAGQMADV
HLQADYTDHG ALRQLGAACA AVTTEFENVP AQSLIELANH CRVSPGAAAV AIAQDRSHEK
SWLAQNGFAT APFALVYSEG DLDAALAEVG TPALLKVARF GYDGKGQARV TDRDGARAAF
AEFGAQPCVL EGFVKLEGEL SVVLARDDAG HCATFPVAEN RHEQGILDVS IVPARVADSL
ADAARTMAQD IAGKLAYVGV MAVEFFVVDG RLLVNEIAPR PHNSGHYTLD ACVTDQFEQQ
VRALCGLPLG DTRLLSPVAM VNILGDRWHD GGPHWSALLA HPAIKLHLYG KETARPGRKM
GHFNVLDTDV EAALKLAEAM RDAL
|
|---|
| |