| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2609 |
|---|
| Symbol | |
|---|
| ID | 3672585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2682618 |
|---|
| End bp | 2684429 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637711315 |
|---|
| Product | sulphate anion transporter |
|---|
| Protein accession | YP_316367 |
|---|
| Protein GI | 74318627 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.107186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.766743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTTC CCGCTGCTCG TAGCTTCCCG TCCTGGCTCA AGCCGTTCAC GTCCTTCCGT
CTCTGGTGGC CGCGCGTCAA CCGCGAGACG ACGCGGGCCG ACCTGATGGC CGGCCTGACC
GGCGCGCTCG TCGCGTTGCC GCAGGGGGTC GCCTTCGCGA CGATCGCCGG CATGCCGCCG
GAGTATGGTC TCTACGCCGG CATGATCCCC GCGATCATCG CCGCGCTCTT CGGCTCGAGC
TGGCATCTGG TCTCGGGTCC GACGACGGCC GCCTCGATCG TGCTGTTCTC GGTGCTCTCG
CCACACGCCG AGCCCGGCAC CGCCCAGTAC GTGAGTCTCG CGCTGACGCT GACCTTCATG
GTCGGGGTGA TCCAGATCGT GATGGGGCTG GCCAAGCTCG GCACGCTCGT GAACTTCATC
TCGCATTCGG TGGTGACCGG TTTCACCGCC GGGGCGGCGA TCCTGATCGC GACCAACCAG
GTTAAACATT TCACCGGTCA GGCGATTCCC CGCGGCGCCT CGTTTTCCGA TACCTGGTCC
CACGCGTTCA CCCACGTGGA CGAAATTCAG GTGGCGATCG CGGCGACCGG CCTCGTCACG
CTACTGCTCG GCATCGCCGT CAAGCGCTGG TTGCCCAGGC TTCCCTACAT GATCGTCGCG
ATGCTCGGCG GCGCCGTGTT CGGCAACGCC ATCGCGCGCG TGCTCGGGGT CGAACTGCCG
ACCGTCGGCG CGCTGCCGGC GAGCCTGCCG CCGCTGTCGG CGCCGGCTTT CGACGCCGAA
AGCGTGCGTG CGGTCGCCTC GGGCGTGATC GCCGTCACCC TGCTGGCGCT GACGGAGGCC
GTGTCGATCG CGCGGGCGCT GGCCGCCCGT TCGGGTCAGC ACGTCGACGG CAACCAGGAA
TTCGTCGGCC AGGGGATGTC GAATCTGGCC GGGGCCTTTT TCTCCGGCTA CGTCGCGACT
GGCTCCTTCA ACCGCAGCGG CGTCAATTTC GCCGCCGGGG CGAAGACGCC GCTCGCGGCA
ATTCTCGCCG GCGTCTTCCT GCTTATTCTC GTGCTCTTCG TCGCGCCCTG GGCGCAGTAC
CTGCCCAATG CGGCCATGGC CGGCATCCTC TTCCTGGTCG CCTGGGGACT GATCGATTTC
GACGAAATCG CCCACACCTT CAAGACCAGC CGCCAGGAAA CCGCGATCAT GGCGGCGACC
TTCGCCGCGA CGCTGTTCCT GACGCTCGAG GAGGCGATCA TCATCGGCGT GCTGCTGTCG
CTCGCGATCT ATCTCTCGCG CACGTCCAAG CCGCAGTTGC GCGTACGTGC GCCGAACCCT
CACCACAAGA AGCGTCACTT CACCGACGCC GAGAACGCGC CGCAGTGTCC GCAGCTGCGC
TTCGTGCGGA TCGACGGTTC GCTGTTCTTC GGCGCCACCT CGCACATTCG CGAAACGCTC
GCAGCCCAGG ACCAGACCGC GCCCGACCAG AAGCACGTCG CGATCGTCGC GCAGGGCATC
AACTTCATCG ATCTGGCCGG CGCACACTAC CTCGCCGAGG AAGCGGAACG GCGTCGCAGC
CAGGGCGGCG GGCTCTATTT CATCCGCGTC AAGGACACGG TGCAGGAACA GCTGGCCGAG
AACGGCGCGC TCAAGACGAT CGGCGGGGCC AATCTGTTCG ACTCGAAGAC CGAGGCGATC
GCCGCGCTCT ACAAACGGCT CGATCCCGCT GTCTGCAGCA TCTGCCGCGC GCGCATCTTC
CGTGAATGCC AGGGACGACC TGCCGAGCAG GCCGTCACGC CCGACCTCGT CATGCCGGTG
TCGCATGCCT GA
|
|---|
| Protein sequence | MSLPAARSFP SWLKPFTSFR LWWPRVNRET TRADLMAGLT GALVALPQGV AFATIAGMPP
EYGLYAGMIP AIIAALFGSS WHLVSGPTTA ASIVLFSVLS PHAEPGTAQY VSLALTLTFM
VGVIQIVMGL AKLGTLVNFI SHSVVTGFTA GAAILIATNQ VKHFTGQAIP RGASFSDTWS
HAFTHVDEIQ VAIAATGLVT LLLGIAVKRW LPRLPYMIVA MLGGAVFGNA IARVLGVELP
TVGALPASLP PLSAPAFDAE SVRAVASGVI AVTLLALTEA VSIARALAAR SGQHVDGNQE
FVGQGMSNLA GAFFSGYVAT GSFNRSGVNF AAGAKTPLAA ILAGVFLLIL VLFVAPWAQY
LPNAAMAGIL FLVAWGLIDF DEIAHTFKTS RQETAIMAAT FAATLFLTLE EAIIIGVLLS
LAIYLSRTSK PQLRVRAPNP HHKKRHFTDA ENAPQCPQLR FVRIDGSLFF GATSHIRETL
AAQDQTAPDQ KHVAIVAQGI NFIDLAGAHY LAEEAERRRS QGGGLYFIRV KDTVQEQLAE
NGALKTIGGA NLFDSKTEAI AALYKRLDPA VCSICRARIF RECQGRPAEQ AVTPDLVMPV
SHA
|
|---|
| |