Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2603 |
Symbol | |
ID | 3672579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2678900 |
End bp | 2679775 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637711309 |
Product | heat shock protein HtpX |
Protein accession | YP_316361 |
Protein GI | 74318621 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.341853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.678894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCA TCGTGCTGTT CCTCGCAACC AACCTTGCGA TCGTGCTGGT GCTCTCGCTC ACCATGCGTC TGCTCGGCGT CGAGCCCTAC CTCACGGCCA ACGGCCTCAA CCTCACGTCG CTGCTGATTT TCGCCGCGGT CATGGGCTTC GGCGGTTCGC TGATTTCGCT CGCGATCTCG AAGTGGATGG CGAAGAAATC GATGGGCGTC CAGGTCATCG AGACACCGGC GAACTCGACC GAGTTCTGGC TCGTCGAGAC GGTGAGGAAA TACGCCGACG ACGCCGGCAT CGGCATGCCC GAAGTCGGCA TCTTCCCGTC GCCAGAAGTC AACGCCTTCG CCACCGGCAT GAACAAGAAC AACGCGCTCG TCGCGGTGTC GGCGGGTCTG CTCAGCACGA TGACGCGCGC CGAGGCCGAG GCCGTGATCG GCCACGAAGT CGCGCACGTC GCCAATGGCG ACATGGTCAC GCTCGCGCTC ATTCAGGGCG TCGTCAATAC CTTCGTGATG TTTCTGTCGC GCATCATCGG CCATACCGTC GATCGCGTCG TGTTCAAGAA CGAGGAGGGG CACGGGCCGG CGTTTTTCGT CACGATGATC GTGGCCGAAC TCGTGCTCGG CATCCTCGCG TCGATCATCG TCATGTGGTT CTCGCGTCAG CGTGAATTCC GCGCCGACCG CGGCGGTGCC TCGCTCGCCG GCAAGGGCGC GATGATCGCC GCGCTCGAGC GCCTGAGGAG TCTGCATCCG CATCCCTTGC CCGACAAGAT GGCGGCCTTC GGTATCGCCG GCGGCGGTGC TGCCGGTCTG AAGCGCCTGT TCATGACGCA CCCGCCGCTG GAGGAGCGCA TTGCGGCACT GCGCGCCGTA CAGTAA
|
Protein sequence | MKRIVLFLAT NLAIVLVLSL TMRLLGVEPY LTANGLNLTS LLIFAAVMGF GGSLISLAIS KWMAKKSMGV QVIETPANST EFWLVETVRK YADDAGIGMP EVGIFPSPEV NAFATGMNKN NALVAVSAGL LSTMTRAEAE AVIGHEVAHV ANGDMVTLAL IQGVVNTFVM FLSRIIGHTV DRVVFKNEEG HGPAFFVTMI VAELVLGILA SIIVMWFSRQ REFRADRGGA SLAGKGAMIA ALERLRSLHP HPLPDKMAAF GIAGGGAAGL KRLFMTHPPL EERIAALRAV Q
|
| |