Gene Tbd_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2601 
Symbol 
ID3672577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2676800 
End bp2677858 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content70% 
IMG OID637711307 
Producthypothetical protein 
Protein accessionYP_316359 
Protein GI74318619 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.99204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.455316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG ATATCGATTC ACCGCTGGCG CGCCGGGCCG TCGCGTTCGC CTTCCTCGTC 
TTCATCTTCG GACTCACCTT CTGGGTGTTG TCGCCGTTTC TCGCGGCGCT CGCCTGGGCC
GGCATCCTGG CCTACGCGAC CTGGCCGCTG TATCAGCGCC TGTCGCGCCG GCTGGCGGGA
CGCGACACGC TGTGCGCGCT GCTGATGACG ATTGCGGTGG TGACCATGCT CCTGTTGCCC
ATGATCTGGG TGACGTCGAT GCTGGCCGGC GACGTCTCGG CGGCTTCGGC CCAGCTGCGG
CTGGTGGCAA CCGAGGGACT GCCGCCGCTG CCCCCCGGCG TGCGAAGCTG GCCCGGCGGC
GACTGGCTCG CCGCGCAATA CGCGCGCATC CAGGCCGATC CGGCCTGGGT CCGTGCCCAG
ATCGACGCGC TCGGACTCAC CGATGCGCAG CGCCTGAAGG CGGTCGCCGG CGGCGTCGGG
CGCAACGTCG CCAAGTTCGC ACTGGCCGTA TTCGCGCTGT TCTTCCTGTT TCGCCACGGC
GCCAGCCTGC TCTCGCAGGT CCGCCGCGTC GCGACCCGCT GGCTCGGCGG CGCGGCGCGC
GGCTACATCC ACGCCGTCGG GGTGACGGTG CGCGCTGTCG TCTTCGGCAT CGTCCTGACC
GCGCTCGCGC AGGGGGCGCT CGCCGCGCTC GGCTACTGGG TCGCCGGCGT AGCGGCGCCC
GTGCTGTGGG GCGTGATCAC CGCACTCGTC GCGCTGATTC CGTTTGTCGG GCCGGTCGTG
TGGATCGGGC TCTCGCTGTC GCTGCTCGCC CAGGGCGAGA GCCAGGCCGC GCTCGGACTG
TTTCTGTGGG GCGCACTGGT CGTGAGTTGG GTCGACAACC TGATCCGCCC GCTCGTCATC
AGTGGGCCGA CGCGGATTCC GTTTCTGCTG GTTTTTCTCG GCGTGCTCGG CGGTCTGCAG
GCCTTCGGCC TGATCGGTCT GTTCCTCGGT CCGGCGCTGC TCGCGATCTC GGTTGCGATC
TGGCGCGAGT GGCTGGTCCG TGTCGAATCG AGCGTCTGA
 
Protein sequence
MPTDIDSPLA RRAVAFAFLV FIFGLTFWVL SPFLAALAWA GILAYATWPL YQRLSRRLAG 
RDTLCALLMT IAVVTMLLLP MIWVTSMLAG DVSAASAQLR LVATEGLPPL PPGVRSWPGG
DWLAAQYARI QADPAWVRAQ IDALGLTDAQ RLKAVAGGVG RNVAKFALAV FALFFLFRHG
ASLLSQVRRV ATRWLGGAAR GYIHAVGVTV RAVVFGIVLT ALAQGALAAL GYWVAGVAAP
VLWGVITALV ALIPFVGPVV WIGLSLSLLA QGESQAALGL FLWGALVVSW VDNLIRPLVI
SGPTRIPFLL VFLGVLGGLQ AFGLIGLFLG PALLAISVAI WREWLVRVES SV