Gene Tbd_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2600 
Symbol 
ID3672576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2676317 
End bp2676742 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID637711306 
Producthypothetical protein 
Protein accessionYP_316358 
Protein GI74318618 
COG category[S] Function unknown 
COG ID[COG3223] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.419221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.415567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTG CCAAAGACCG GTTCGCGCGG GTTGCGCTCG GCGCGCTCGG TGTGTTCGAG 
ACGATCGGCC TCGCCGTCAT CACGCTGGCG ACCCTGGTCG CCGGCGTGTT CGAAGTCGGG
GTCATGATCG ACGCCGGGAC GGTGACGCTG GCCGATCTGC TGCTGCTGTT CCTGTATCTG
GAAATTCTTG CGATGGTCGG CCAGTATTTC CGTTCCGGCC AGCTGCCGGT GCGTTTCCCG
ATTTACATCG CCATCGTCGC GCTCGCGCGC TACCTGGTTC TCGACATGAA AAGTCTCGAC
GTCTGGCGCA TGCTCGGCGT GACCGCGTCG ATGCTGCTTC TGGCGTGTGC CGTGCTCGTG
ATCCGCTACG GACACACGCG TTTCCCCTAC GACGAAACGT CCAAAGGTAA AGATTTCCAG
CCATGA
 
Protein sequence
MNPAKDRFAR VALGALGVFE TIGLAVITLA TLVAGVFEVG VMIDAGTVTL ADLLLLFLYL 
EILAMVGQYF RSGQLPVRFP IYIAIVALAR YLVLDMKSLD VWRMLGVTAS MLLLACAVLV
IRYGHTRFPY DETSKGKDFQ P