Gene Tbd_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2587 
Symbol 
ID3672563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2662807 
End bp2663982 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content70% 
IMG OID637711293 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_316345 
Protein GI74318605 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.1872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTAG CAGACAAAAA AATCGTTCTC GGGGTGACGG GCGGGATCGC CGCCTACAAG 
GCTGCGGAAT TGTGCCGGCT GCTCGTCAAG GCGGGTGCCG ACGTAAAGGT GGTGATGACC
GACGCCGCCC AGCGCTTCGT CACCCCGCTG ACCTTCCAGG CCCTCTCCGG CAAGCCGGTG
CTGACCGCCA TGTGGGACGC GGCGGGCGAT GGCATGGCCC ACATTCACCT CTCGCGCGAC
GCCGATCTCG TGCTGGTCGC GCCGGCTTCT GCCGATTTCC TCGCCAAGCT CGCGCACGGT
CGGGCCGACG ACCTGCTGTC GACGCTGTGT CTCGCGCGCG CCTGCCGCCT TGCCGTCGCG
CCCGCGATGA ACCGCGAAAT GTGGGCTGCC GCGCCGACCC GGCGCAACCT CGACCAACTG
CGCGCGGACG GCGTCTGCCT GCTCGGCCCC GAGGCCGGCG AGCAGGCCTG CGGCGAAACC
GGACCGGGGC GCATGCTCGA ACCGGTGGAC ATCGTCGCCG GCCTGTCGCC GCTCTTCACT
ACCGGAGTTC TCGCCGGTCG CCGCGTGCTC ATCACGGGCG GGCCGACCTA CGAGGCGATC
GACCCGGTAC GCGGACTGAC CAACCGCAGT TCGGGCAAGA TGGGTTACGC GCTCGCGCGC
GCGGCACACG AGGCCGGCGC CGAGGTCTGT CTGGTCTCGG GACCGACCTG CCTGACGACG
CCGGCCGGCG TACGCCGCGT CGACGTGCAA AGTGCCACCG AGATGCGCGA GGCCGTGCTG
CGCGAACTTC CCGCCAACGT CTTCATCGCC GTCGCGGCCG TCGCCGACTA CCGGGTCGAG
GCCGCGGCGC CGCAGAAGAT CAAGAAATCC GGGGGCGGCC TCACGCTCAC GCTCGTCGCC
AACCCCGACA TCCTGGCCGA AGTCGCTGCC CGTCCGGATG CGCCGTTTTG TGTCGGTTTC
GCCGCCGAGA CCGAACGCCT CGCCGAGCAC GCCGAGGCCA AGCGCCGGCA GAAAAAGCTG
CCGCTGCTGG TCGGCAACCT CGCGCCCGAC ACGCTCGGGG CGGACGCGGC AGAACTCGTG
CTTTTCGACG ACGACGGCGC GCACCGGCTT CCCCGCGCCG ACAAACTCGA GCAGGCGCGC
GCGCTCATCC GCCATATCGC AAGTCACCTC AACTGA
 
Protein sequence
MSLADKKIVL GVTGGIAAYK AAELCRLLVK AGADVKVVMT DAAQRFVTPL TFQALSGKPV 
LTAMWDAAGD GMAHIHLSRD ADLVLVAPAS ADFLAKLAHG RADDLLSTLC LARACRLAVA
PAMNREMWAA APTRRNLDQL RADGVCLLGP EAGEQACGET GPGRMLEPVD IVAGLSPLFT
TGVLAGRRVL ITGGPTYEAI DPVRGLTNRS SGKMGYALAR AAHEAGAEVC LVSGPTCLTT
PAGVRRVDVQ SATEMREAVL RELPANVFIA VAAVADYRVE AAAPQKIKKS GGGLTLTLVA
NPDILAEVAA RPDAPFCVGF AAETERLAEH AEAKRRQKKL PLLVGNLAPD TLGADAAELV
LFDDDGAHRL PRADKLEQAR ALIRHIASHL N