Gene Tbd_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2567 
Symbol 
ID3672543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2641432 
End bp2642190 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content73% 
IMG OID637711273 
Producturoporphyrinogen-III synthase 
Protein accessionYP_316325 
Protein GI74318585 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.134092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CCCTGGCCGG GCGCACGATC CTCGTCACCC GCGCGCCGCG CCAGGCGGCC 
GCCTTGAGCG CGGCGATCCG CGCGGCCGGC GGCAGCGCGT TCGAGTTCCC CGCGCTCGCC
TTCGAAGCCG TGCCGGTCGA CCGCTTGCAA GCGTCGCTCG CGCAGGTCGT CGCCGCCGAT
TTCGTGATTT TCGTCAGCCC GAATGCGGCG GAATTCGGCA TGGCCGCGAT CGGCAGCTTG
GCCGCCGGGC GCAGCGTCCT CGCCGTCGGT CCGGGAACCG CGCGCGCCCT CGCGGCCCAA
GGGCTCGATG CCGTGATCAC GCCCGACGGC CAGGACAGCG AGGCCTTGCT CGCGCTCCCG
CAGTTGCTCG ACGTCGACGG CAAACGCGTC GTCATCGTGC GCGGCATCGG CGGGCGCGCG
CTCCTGGGCG ACACGCTCGC CGCGCGCGGC GCCGAGGTCC ATTACATGGA GTGCTACCGG
CGCCTAGCGC CGACGGCCGA TGCGGCGCCG CTGATCGCGC GCTGGCAAGC CGGCGGGATC
GACGCCGTCA CCGTGGCGAG CGCCGAGACG CTGCACAATC TGGCCGCGCT GCTTGGCGAG
GCCGGGGCGC CGCTGCTTGC ACATACGCCG CTTTTCGCGC CGTATGAGAA AATCGCCGCC
GCTGCGCGCA GCTTCGGTGT CGCCCAGGCC ACGGCAACGC CCGGCGGCGA CGCCGGACTC
GTCGCGGGTC TCGTCAACTG GTTCAGGAAT ACCGCATGA
 
Protein sequence
MTQPLAGRTI LVTRAPRQAA ALSAAIRAAG GSAFEFPALA FEAVPVDRLQ ASLAQVVAAD 
FVIFVSPNAA EFGMAAIGSL AAGRSVLAVG PGTARALAAQ GLDAVITPDG QDSEALLALP
QLLDVDGKRV VIVRGIGGRA LLGDTLAARG AEVHYMECYR RLAPTADAAP LIARWQAGGI
DAVTVASAET LHNLAALLGE AGAPLLAHTP LFAPYEKIAA AARSFGVAQA TATPGGDAGL
VAGLVNWFRN TA