Gene Tbd_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2563 
Symbol 
ID3672539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2637542 
End bp2638579 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID637711269 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_316321 
Protein GI74318581 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATC AAGTCACGAT TCAGCCCAGC GGACACCGGT TCACCGTCGA GGACGACGAA 
ACGATACTCG AAGCCGCGCT GCGGGAAGGC TTCTCGCTGC CCTACGGCTG CCGCAACGGG
GCGTGCGGCT CGTGCAAGGG CACGGTCCTG CAGGGCGAGC TCGATTATGG CGTCTATCAG
CCCAATGCGC TCAAGGACGA GGAGAAGGCG CGCGGACGCG CGCTCTTCTG CCGGGCGAAG
CCGCTGTCCG ACATGGCGAT CGAAGTCCGC GAGATCGGTG CGAGCAAGGA CATCATCGTC
AAGACGATGC CGTGCCGCGT CGAAAAACTC GAGAAGCTCG CCGACGACGT CATGCGCGTG
CGCATCAAAT TGCCGGCCAA CGAGCGCCTG CAATTCCTCG CCGGGCAGTA CATCGATTTC
CAGCTCAAGG ATGGACGGAC GCGCAGCTAT TCGCTCGCCA ACGCCCCGCA TGACGATGCC
CTGCTCGAAC TGCACATCCG TCACGTCCCC GGCGGTCTGT TCACCGATCA GGTTTTCACC
ACGCTCAAGG AACGCGACAT CCTGCGGCTC AAGGGCCCGC TAGGCAGCTT CTTCATTCGC
GAGGATTCCG ACAAGCCGAT GATTTTCGTC GCCGGTGGCA CCGGCTTCGC GCCGATCAAG
AGCATGCTCG AGCACGCGTT CGCCACGCAT ACCGACCGCG AGCTCGTGCT TTACTGGGGC
GCGCGTGCGC GCAAGGACCT CTACCTCGCC GAGTTGCCGC AGCAGTGGCT CGCCGAACGG
CCCAATTTCA GCTTCATTCC GGTCCTGTCG CAGGCCGAGC CGGACGACGC CTGGCAAGGC
CGCACGGGCT TCGTGCACGA GGCCGTTCTC GCCGATTTCG CCGACCTTTC CGGCTATGAG
GTGTACACCA GCGGCGCCCC GGCGATGGTC GACAGTGCGC GCGAGAGTTT CGTGAATACG
CGCGGGCTGC CCGAGGACGC GTTCTTCGCC GACGCCTTCG TCTACGCCGC GGACACCCTC
GCGGCGACGT CCGCGTAA
 
Protein sequence
MSHQVTIQPS GHRFTVEDDE TILEAALREG FSLPYGCRNG ACGSCKGTVL QGELDYGVYQ 
PNALKDEEKA RGRALFCRAK PLSDMAIEVR EIGASKDIIV KTMPCRVEKL EKLADDVMRV
RIKLPANERL QFLAGQYIDF QLKDGRTRSY SLANAPHDDA LLELHIRHVP GGLFTDQVFT
TLKERDILRL KGPLGSFFIR EDSDKPMIFV AGGTGFAPIK SMLEHAFATH TDRELVLYWG
ARARKDLYLA ELPQQWLAER PNFSFIPVLS QAEPDDAWQG RTGFVHEAVL ADFADLSGYE
VYTSGAPAMV DSARESFVNT RGLPEDAFFA DAFVYAADTL AATSA