Gene Tbd_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2543 
Symbol 
ID3672519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2613506 
End bp2614045 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID637711249 
Producthypothetical protein 
Protein accessionYP_316301 
Protein GI74318561 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.603561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG ACGCCGTTCC CCGCCAGCCG ATCGAAGCCC GCGGCAAATT CCTCTCCACG 
ATCCTGTTCG GAAGCCGCTG GCTTCAGGTC CCGCTGTATC TGGGCCTGAT CGGTGCGCAA
CTCGTGTACG TCGTCCATTT CATGGTCGAA CTCGAGCATC TCGTCGTCGG CACCTTCACG
CTGTCCGAAG AGGCGATCAT GCTGATCGTG CTCGGCCTGA TCGACGTCGT CATGATTTCG
AACCTGCTGA TCATGGTCAT CGTCGGCGGC TACGAGACCT TCGTCTCGCG CCTCAACCTC
GAGGGCCATC CCGACGAGCC CGAGTGGCTG TCGCACGTCA ACGCCAACGT GCTGAAGGTC
AAGCTCGCGA CTGCGATCAT CGGCATCTCG TCGATCCACC TGTTGAAGAC CTTCATCAAC
GCGCCCAACC TTGCCGACAA GGTGCTGCTC TGGCAGACCG TCATCCACAT GGCGTTCATC
GTCTCGGCGG TCGCGATCGC CTACATCGAC AAGCTGATGC CGCAGACCGG CAAGCACTAA
 
Protein sequence
MKSDAVPRQP IEARGKFLST ILFGSRWLQV PLYLGLIGAQ LVYVVHFMVE LEHLVVGTFT 
LSEEAIMLIV LGLIDVVMIS NLLIMVIVGG YETFVSRLNL EGHPDEPEWL SHVNANVLKV
KLATAIIGIS SIHLLKTFIN APNLADKVLL WQTVIHMAFI VSAVAIAYID KLMPQTGKH