| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2539 |
|---|
| Symbol | |
|---|
| ID | 3672515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2609430 |
|---|
| End bp | 2610200 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637711245 |
|---|
| Product | zinc/manganese transport system permease protein |
|---|
| Protein accession | YP_316297 |
|---|
| Protein GI | 74318557 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.421777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGG CGTTCGCCCC CGACCTGCTG GCCTGGCCCT TCGCGGTCGG GCTGCTGGTG
CTCGCGACCC ACGTCCCGCT CGGGCGGCGG GTGCTCGCGC GCGGCATCAT TTTTCTCGAC
CTCGCGATCG CGCAGCTCGC CGTCCTCGGC GTAGTCGCGG CACACGCCCT CGATCTCGCC
GCCAGCGACT GGGCCACGCA GGCCGCCGCG GCGACGGCCG CGCTCGCGGG CGCCGCGCTG
CTCGCAGGCT TCGAAAAGCG CTGGCCCGCG ATCCAGGAAG CGCTGATCGG TTCGAGCTTT
GTCGTCGGCG CCAGCCTCGC CGTCCTGCTG CTGGCGGGCG ACCCCCACGG CGGCGAGCAT
CTGGCCGAAC TGCTGACCGG CCAGCTTTTG TGGGCGACGC GTTCGCAGGC GCTGTGGATC
GCCGCGCTGT ACGCGCTGCT GCTCGCGGTA ATGGCATGGC GGCGCGAGCG CCTCACAGGT
CTCCCCTTCT ATCTCGTCTT CGCGCTGGCG ATCACGGCGT CCGTGCAACT GGTCGGCGTG
TATCTGGTGT TCGCGAGCCT GATTCTGCCG GCGCTGGCGG TGCGCGGGCT GGCCCCAGCC
CGCGCCGTCG CGAGCGGCTG GCTGCTCGGT GCCGCGGGCT ACGGTGGCGG CCTCGCATTC
TCGGCCGGCT ACGACCTGCC GGCAGGGCCC GCGATCGTCG TCGCGCTGGC CGTCATCGCC
CTCCTGGGCG GCGCCCTGCT TCGGGTTGCC GCAGCGGGTG GAGAGCGCTA G
|
|---|
| Protein sequence | MNAAFAPDLL AWPFAVGLLV LATHVPLGRR VLARGIIFLD LAIAQLAVLG VVAAHALDLA
ASDWATQAAA ATAALAGAAL LAGFEKRWPA IQEALIGSSF VVGASLAVLL LAGDPHGGEH
LAELLTGQLL WATRSQALWI AALYALLLAV MAWRRERLTG LPFYLVFALA ITASVQLVGV
YLVFASLILP ALAVRGLAPA RAVASGWLLG AAGYGGGLAF SAGYDLPAGP AIVVALAVIA
LLGGALLRVA AAGGER
|
|---|
| |