| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2532 |
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| Symbol | |
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| ID | 3671851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2603816 |
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| End bp | 2604895 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637711238 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_316290 |
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| Protein GI | 74318550 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.19676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.860631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTT TTCTCCCCCT GTTTGCCGCC CTGCTCGCAC TCGGGGGCTG TGGCGGCGAC
GAGTCGGCGG CGTCACGGGT CGCCGACGTC CGCACGGTGC GCGCCGAACG CGCCGGACTC
GCCGCCGAGG CACCGGTCGT GCGCTACGCC GGCACCGTCC ACGCACGCTA CGAGACCGAC
CTCGCATTCC GCGTCGGCGG CCGGGTGCAA AGCCGCACGG CCGAGATCGG CTCGCGGGTC
CGGGCGGGCG AGGTGCTCGC GACGCTCGAC CCGCGGGACT ACGCGCTCGA CACGGCCGCG
GCGCGTGCCC AGCTCGCCGC CGCCGAAGCC GAAGCGAAGC TCGCGCGGGC CGACATCGAG
CGCTTCCGCG CCTTGCGGGC GCAGAATTTC ATTTCCCAGG CCGAGCTCGA TCGCCGCGAA
GCGCTCGCCG ACGCTGCGCG GGCGCGGGTG CAGGCGCTGC GCGCCGAGGC GTCGCGGCTC
GGCAACCAGC AGGCCTATAC CCGGCTCACC GCGCCGCACG CCGGCGTGAT CACGGCGATC
TCGTTCGAGA CCGGCCAGGT CGTCGAGGCG GGGCAGCCGC TCGCGCAGCT CGCCCGCAGC
GGCGAACTCG AAGTCCGCGT CGACGTCCCC GAGAACGGGC TCGACGCCTT GCGTACGGCG
CGCACGCTCG ACGTGCGCCT GTGGTCGGTG CCGGGCAAGG TCTACCGGGG TCGCCTGCGC
GAACTTGCAC CGATGGCCGA TGCGGCGACG CGGACCTACC GCGCGCGCAT CAGCCTCGCC
GAACCGGACG CCGCGGTGCG CCTCGGCATG ACCGCGACGG TCGACGTCCT CGGCAGCGCC
TCGCCTGCGC TCACGGTCCC GCAAAGCGCG CTGTTCCGGG TCAATGGCCG CCCCCAGCTC
TGGGTCGTCG ACCCCGCGAC GCGCAAGGTC GCCACGCGCA GCGTGGAACT CGGTGAACTG
AAGGCGGACC GTGCCGAGAT CCGCGCGGGC CTCGCTGCGG GCGAGTGGGT CGTGACCGCG
GGCGTGCACA AGCTCGCGCC CGGGCAGGAG GTGCGCCTGG TCGAGTCGGC GCGTTCATGA
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| Protein sequence | MKAFLPLFAA LLALGGCGGD ESAASRVADV RTVRAERAGL AAEAPVVRYA GTVHARYETD
LAFRVGGRVQ SRTAEIGSRV RAGEVLATLD PRDYALDTAA ARAQLAAAEA EAKLARADIE
RFRALRAQNF ISQAELDRRE ALADAARARV QALRAEASRL GNQQAYTRLT APHAGVITAI
SFETGQVVEA GQPLAQLARS GELEVRVDVP ENGLDALRTA RTLDVRLWSV PGKVYRGRLR
ELAPMADAAT RTYRARISLA EPDAAVRLGM TATVDVLGSA SPALTVPQSA LFRVNGRPQL
WVVDPATRKV ATRSVELGEL KADRAEIRAG LAAGEWVVTA GVHKLAPGQE VRLVESARS
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