Gene Tbd_2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2527 
Symbol 
ID3671846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2597737 
End bp2598408 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID637711233 
Producthypothetical protein 
Protein accessionYP_316285 
Protein GI74318545 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.448456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.216291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA TCAGCGACAT GCAGCCCGAG CAGATTGCCG ATTACCTGAC GCGGCATCCG 
AATTTCTTCA ACGACTTCCC GACGTTACTC GCCGACATCC ACATCCCGCA TCCGCATGGC
ACGCACGCGG TGTCGATGAG CGAACGGCAG CTGATCGCGA TGCGCGACAA GGTGCGCATG
CTGGAAAACA AGCTCGCCGA ACTGATCCAG TTCGGCGAGG AGAACGACGG CATCTCCGAG
AAGCTGCACG CGCTGACGCT CGCCCTGCTC GCCGCGCGCA CGCCGCAGGA GGTCGTCGCG
GCACTCGCGC TCCACCTGCG CGAAGGCTTT GCCGTGCCGC ACCACGCCCT GCGCGTCTGG
AACCTCGAGG CCGAGGCGCC GACGCTCAGC GAGCCCGTGT CGCCGGACCT GCGCGACGCG
GTCACGACGC TCGCGCAGCC GGCCTGCGGC CCCTTGACGA TCGACGAAGC CGGCGCGTGG
TTCGGCGAGA TCGCACCGCA CCTGCGCACC TTCGCCTTCA TTCCGCTGCG CCCGGCCGCG
ACGGTCGCGC CGATCGGCCT GCTGGTGCTC GCCTCCGAGG AAGCGCGCCG CTTCTACCCG
GGCATGGGCA CGCTCTATCT CGAACGACTC GGACAGATGC TCGGCGCCGC GCTGGTGCGG
ATGCAGGATT GA
 
Protein sequence
MNAISDMQPE QIADYLTRHP NFFNDFPTLL ADIHIPHPHG THAVSMSERQ LIAMRDKVRM 
LENKLAELIQ FGEENDGISE KLHALTLALL AARTPQEVVA ALALHLREGF AVPHHALRVW
NLEAEAPTLS EPVSPDLRDA VTTLAQPACG PLTIDEAGAW FGEIAPHLRT FAFIPLRPAA
TVAPIGLLVL ASEEARRFYP GMGTLYLERL GQMLGAALVR MQD