Gene Tbd_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2509 
Symbol 
ID3671828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2582510 
End bp2583643 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID637711215 
Productalanine-glyoxylate aminotransferase 
Protein accessionYP_316267 
Protein GI74318527 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTT CCTTCCTCCC TCCCAAGCGC ATCCTCATGG GTCCCGGCCC GTCCGACGTA 
CCGCAGCGCG TGCTCGACGC GATGGCGCGT CCGACGATCG GCCACCTCGA CCCGGCCTTC
GTCGACCTGA TGGAGCAGAT CAAGGCCATG TTGCGCATGG CGTTCCGGAC CGAGAACGCG
CTGACCTTCC CGGTTTCGGC CCCCGGTTCG GCAGGGATGG AGATGTGCTT CGTCAACCTC
GTCGAGCCCG GCGACAAGGT CATCGTCTGC CGCAACGGCG TGTTCGGCGG ACGCATGCTC
GAGAACGTCA AGCGCACGGG CGGCGTGCCG GTGGTCGTCG ATGACGCCTG GGGCGCAGCG
GTCGACCCGC AAAAGGTGCG CGATGCCTTC AAGTCGAACC CGGACGCCAA GGTGCTCGCC
TTCGTGCACG CCGAGACGTC GACCGGCGCG CAGTCCGACG CTGCGGCCCT GGCGAAGATC
GCGCAGGAAG CCGGCGCGCT CACGATCTTG GACTGCGTCA CGAGCCTGGG CGGAACGCCC
GTGCTGCTCG ACCAGTGGCG CATCGACGCC GCTTACTCCG GCAGCCAGAA GTGCCTGTCG
TGCACGCCGG GCCTCTCGCC GGTCTCGTTC TCGGAACGTG CCATCGAAAA GATCAAAGCA
CGCAAGACGC CCGTGCAGAG CTGGTTCCTC GACCTCAATC TCGTGCTCGG CTACTGGCAG
TCGGCGGGCA AACGCACCTA TCACCACACC GCGCCGATCA ATCCGATGTA TGGCCTGCAC
GAGTCGCTGG TGATGCTCGA GGAGGAAGGC CTGGAGAATT CCTGGGCGCG CCATCGTGCG
ATGCACGAGA AGCTGAAGGC TGGCCTCGAA GGGCTCGGCC TGCGTTATGT CGTCGAGGAA
AGCGCCCGCC TGCCGCAGCT CAACTCGATC TACGTGCCTG AAGGCGTCGA CGAAGCCGCG
ATCCGCAGCC GGCTCCTGAG CGAGTTCAAT CTCGAAATCG GTGCCGGACT CGGCGACATG
GCCGGCAAGA TCTGGCGCAT CGGCCTGATG GGCTATTCGG CCAAGCAGGC GAACATCGAC
CTTTGCCTGC AGGCGCTGAG TGCCTGCCTC GAGAAAAGCG CAGCCGGGGC TTGA
 
Protein sequence
MTASFLPPKR ILMGPGPSDV PQRVLDAMAR PTIGHLDPAF VDLMEQIKAM LRMAFRTENA 
LTFPVSAPGS AGMEMCFVNL VEPGDKVIVC RNGVFGGRML ENVKRTGGVP VVVDDAWGAA
VDPQKVRDAF KSNPDAKVLA FVHAETSTGA QSDAAALAKI AQEAGALTIL DCVTSLGGTP
VLLDQWRIDA AYSGSQKCLS CTPGLSPVSF SERAIEKIKA RKTPVQSWFL DLNLVLGYWQ
SAGKRTYHHT APINPMYGLH ESLVMLEEEG LENSWARHRA MHEKLKAGLE GLGLRYVVEE
SARLPQLNSI YVPEGVDEAA IRSRLLSEFN LEIGAGLGDM AGKIWRIGLM GYSAKQANID
LCLQALSACL EKSAAGA