Gene Tbd_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2505 
SymbolmtgA 
ID3671824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2577571 
End bp2578269 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID637711211 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_316263 
Protein GI74318523 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TATGGCGCTG GCTCGGCAAG GGCGTCGCGG CAGCCGTCGC GCTGGTGCTG 
CTCTACCAGC TCTGGATCTT TGCGCACGTG TTGTGGTGGA TCGACCACGA TCCCCGCTCC
ACGGCCTTCA TGGAAACGGG CCTCGCGCGC CAGCAGGCGA AGAACCGCGA CGCCGTGCTG
CGCCACAAGT GGGTGCCCTA CGACCGCATC TCCAATAATC TCAAGCGCGC AGTCGTCGCC
GCCGAAGACG CGCGCTTCGT CGAGCACGCC GGCTTCGACG TCGCGGGCAT CCAGAAGGCG
TTCCAAAAGA ATGTGAAAAA AGGCCGCCTC GTCGCCGGCG GCTCGACGAT CACCCAGCAG
CTCGCGAAGA ACCTCTTCCT CTCCGGCGAA CGCAGCTTCC TGCGCAAAGG TCAGGAAGTC
GTCATCACGC TCATGATCGA GTCGACCTGG AGCAAGCGCC GCATCCTCGA GGTCTACCTC
AACGTCATCG AATGGGGCAA CGGCATCTAC GGCGCCGAAG CCGCGTCACG CCGCTACTAC
AAGAAGTCCG CCGCGACCCT CAGCCGCGAC CAGGCTGCAC GCATGGCCGC GATGATCCCG
AATCCGCGCT GGTACGAGAA CCACCGCGGG TCGCGGCTGT ATCAAAGGCG GGTGGTATTG
ATCAAGCGGT ATATGGGGAG TGTGGCGGTG CCGCGATAA
 
Protein sequence
MRTLWRWLGK GVAAAVALVL LYQLWIFAHV LWWIDHDPRS TAFMETGLAR QQAKNRDAVL 
RHKWVPYDRI SNNLKRAVVA AEDARFVEHA GFDVAGIQKA FQKNVKKGRL VAGGSTITQQ
LAKNLFLSGE RSFLRKGQEV VITLMIESTW SKRRILEVYL NVIEWGNGIY GAEAASRRYY
KKSAATLSRD QAARMAAMIP NPRWYENHRG SRLYQRRVVL IKRYMGSVAV PR